Professor Peter Hunter
University of Auckland

Abstract:

The VPH/Physiome project continues to develop the markup language standards CellML, FieldML and BioSignalML to complement the SBML standard used in systems biology. It is also developing the OpenCOR software tool for integrating lumped parameter CellML models and the OpenCMISS tools Iron and Zinc for solving and visualising spatially varying FieldML models. The Physiome Model Repository PMR now supports annotation of models (staging.physiomeproject.org) using the Ricordo ontological framwork and supports collaborative workspaces for model development prior to model exposure. 

Professor Peter Hunter's lecture will discuss the current state of these standards, tools and databases, and anticipated future developments.