2025

• Foote, Andrew David; Gilbert, Marcus Thomas Pius; Shyam, Gopalakrishnan,; Marie, Louis,; Martin, Michael David; A., Morin, Phillip. (2025) Evidence of long-term purging of mutation burden in killer whale Orcinus orca genomes. Heredity
  Academic article
• Filatova, Olga A.; Fedutin, Ivan D.; Borisova, Ekaterina A.; Meschersky, Ilya G.; Shitova, Marina V.; Hoyt, Erich. (2025) Complete Mitochondrial Genomes Provide Evidence of a Killer Whale Refugium Off the Coast of Japan During the Last Glacial Maximum. Journal of Biogeography
  Academic article
• Baumgartner, Chérine D.; Jourdain, Eve Marie; Bonhoeffer, Sebastian; Borgå, Katrine; Heide-Jørgensen, Mads P.; Karoliussen, Richard. (2025) Kinship clustering within an ecologically diverse killer whale metapopulation. Heredity
  Academic article
• Reeves, Isabella M.; Totterdell, John A.; Sandoval-Castillo, Jonathan; Betty, Emma L.; Stockin, Karen A.; Stewart, Ramari Oliphant. (2025) Admixture Increases Genetic Diversity and Adaptive Potential in Australasian Killer Whales. Molecular Ecology
  Academic article

2024

• Laine, Jan Tapio; Mak, Sarah S.T.; Martins, Nuno F.G.; Chen, Xihan; Gilbert, Marcus Thomas Pius; Jones, Felicity C.. (2024) Late Pleistocene stickleback environmental genomes reveal the chronology of freshwater adaptation. Current Biology
  Academic article
• Jourdain, Eve Marie; Karoliussen, Richard; Martin, Sarah Louise; Langangen, Øystein Ole Gahr; Robeck, Todd; Borgå, Katrine. (2024) Social and genetic connectivity despite ecological variation in a killer whale network. Proceedings of the Royal Society of London. Biological Sciences
  Academic article
• Meyer, Laura; Barry, Pierre; Riquet, Florentine; Foote, Andrew David; Der Sarkissian, Clio; Cunha, Regina L.. (2024) Divergence and gene flow history at two large chromosomal inversions underlying ecotype differentiation in the long-snouted seahorse. Molecular Ecology
  Academic article
• Garroway, Colin J.; Greef, Evelien de; Lefort, Kyle J.; Thorstensen, Matt J.; Foote, Andrew David; Matthews, Cory J. D.. (2024) Climate change introduces threatened killer whale populations and conservation challenges to the Arctic. Global Change Biology
  Academic article

2023

• Foote, Andrew David; Alexander, Alana; Ballance, Lisa T.; Constantine, Rochelle; Muñoz, Bárbara Galletti Vernazzani; Guinet, Christophe. (2023) "Type D" killer whale genomes reveal long-term small population size and low genetic diversity. Journal of Heredity
  Academic article
• Reeves, Isabella; Totterdell, John A.; Betty, Emma; Donnelly, David M.; George, Angela; Holmes, Steven. (2023) Ancestry testing of "Old Tom," a killer whale central to mutualistic interactions with human whalers. Journal of Heredity
  Academic article
• Louis, Marie; Korlević, Petra; Nykänen, Milaja; Archer, Frederick; Berrow, Simon; Brownlow, Andrew. (2023) Ancient dolphin genomes reveal rapid repeated adaptation to coastal waters. Nature Communications
  Academic article

2022

• Louis, Marie; Korlević, Petra; Nykänen, Milaja; Archer, Frederick I.; Berrow, Simon; Brownlow, Andrew. (2022) Ancient dolphin genomes reveal rapid repeated adaptation to coastal waters. BioRxiv
  Academic article
• Foote, Andrew; Bunskoek, Paulien; Sanger, Wellcome. (2022) The genome sequence of the killer whale, Orcinus orca (Linnaeus, 1758). Wellcome Open Research
  Academic article
• Foote, Andrew. (2022) Are “Type 2” killer whales long in the tooth? A critical reflection on the discrete categorization of Northeast Atlantic killer whales. Marine mammal science
  Academic article

2021

• Kirch, Melanie; Romundset, Anders; Gilbert, Marcus Thomas Pius; Jones, Felicity C.; Foote, Andrew. (2021) Ancient and modern stickleback genomes reveal the demographic constraints on adaptation. Current Biology
  Academic article
• Louis, Marie; Galimberti, Marco; Archer, Frederick; Berrow, Simon; Brownlow, Andrew; Fallon, Ramon. (2021) Selection on ancestral genetic variation fuels repeated ecotype formation in bottlenose dolphins. Science Advances
  Academic article
• Taylor, Rebecca S.; Jensen, Evelyn L.; Coltman, David; Foote, Andrew; Lamichhaney, Sangeet. (2021) Seeing the whole picture: What molecular ecology is gaining from whole genomes. Molecular Ecology
  Editorial
• Taylor, Rebecca S.; Jensen, Evelyn L.; Coltman, David; Foote, Andrew; Lamichhaney, Sangeet. (2021) Seeing the whole picture: What molecular ecology is gaining from whole genomes. Molecular Ecology
  Editorial
• Foote, Andrew; Hooper, Rebecca; Alexander, Alana; Baird, Robin; Baker, Charles Scott; Ballance, Lisa. (2021) Runs of homozygosity in killer whale genomes provide a global record of demographic histories. Molecular Ecology
  Academic article
• Foote, Andrew; Gilbert, Marcus Thomas Pius; Gopalakrishnan, Shyam; Louis, Marie; Martin, Michael David; Morin, Phillip A.. (2021) Evidence of long-term purging of mutation load in killer whale genomes. BioRxiv
  Academic article
• Papadopulos, Alexander; Helmstetter, A.; Osborne, Owen; Comeault, Aaron; Wood, Daniel; Straw, Edward. (2021) Rapid Parallel Adaptation to Anthropogenic Heavy Metal Pollution. Molecular Biology and Evolution (MBE)
  Academic article

2020

• Dehasque, Marianne; Ávila-Arcos, María C; Díez-del-Molino, David; Fumagalli, Matteo; Guschanski, Katerina; Lorenzen, Eline D.. (2020) Inference of natural selection from ancient DNA. Evolution Letters
  Academic article
• Morin, Phillip A.; Alexander, Alana; Blaxter, Mark; Caballero, Susana; Fedrigo, Olivier; Fontaine, Michaël C.. (2020) Building genomic infrastructure: Sequencing platinum-standard reference-quality genomes of all cetacean species. Marine mammal science
  Academic article
• Hosegood, Jane; Humble, Emily; Ogden, Rob; Bruyn, Mark de; Creer, Simon; Stevens, Guy. (2020) Phylogenomics and species delimitation for effective conservation of manta and devil rays. Molecular Ecology
  Academic article