2025

• Iveland, Tobias Solli; Hagen, Lars; Sousa, Mirta; Liabakk, Nina-Beate; Aas, Per Arne; Sharma, Animesh. (2025) Cytotoxic mechanisms of pemetrexed and HDAC inhibition in non-small cell lung cancer cells involving ribonucleotides in DNA. Scientific Reports
  Academic article
• Resell, Mathilde Victoria; Rabben, Hanne-Line; Sharma, Animesh; Hagen, Lars; Hoang, Linh; Skogaker, Nan Elisabeth Tostrup. (2025) Proteomics profiling of research models for studying pancreatic ductal adenocarcinoma. Scientific Data
  Academic article
• Resell, Mathilde Victoria; Rabben, Hanne-Line; Sharma, Animesh; Hagen, Lars; Hoang, Linh; Tostrup-Skogaker, Nan. (2025) PROTEOMICS PROFILING OF RESEARCH MODELS FOR STUDYING PANCREATIC DUCTAL ADENOCARCINOMA. Scientific Data
  Article in business/trade/industry journal
• Resell, Mathilde Victoria; Graarud, Elisabeth Pimpisa; Rabben, Hanne-Line; Sharma, Animesh; Hagen, Lars; Hoang, Linh. (2025) Knowledge Discovery in Databases of Proteomics by Systems Modeling in Translational Research on Pancreatic Cancer. Proteomes
  Academic article

2024

• Farjami, Toktam; Sharma, Animesh; Jensen, Ida-Johanne; Falch, Eva. (2024) A proteomics–bioinformatics approach to assess the molecular and physicochemical properties of brewer's spent grain protein concentrates: Effect of alkali-heat treatment. Journal of Agriculture and Food Research
  Academic article
• Farjami, Toktam; Sharma, Animesh; Hagen, Lars; Jensen, Ida-Johanne; Falch, Eva. (2024) Comparative study on composition and functional properties of brewer's spent grain proteins precipitated by citric acid and hydrochloric acid. Food Chemistry
  Academic article
• Olaisen, Camilla; Røst, Lisa M.; Sharma, Animesh; Søgaard, Caroline Krogh; Khong, Tiffany; Berg, Sigrid Ravn. (2024) Multiple Myeloma Cells with Increased Proteasomal and ER Stress Are Hypersensitive to ATX-101, an Experimental Peptide Drug Targeting PCNA. Cancers
  Academic article
• Eidsaa, Marius; Sharma, Animesh; Janasch, Markus; Skoczyńska, Anna; Bartolomeo, Francesca Di; Kuch, Alicja. (2024) Unravelling the Proteomic Landscape of Imipenem Resistance in Pseudomonas aeruginosa: A Comparative Investigation between Clinical and Control Strains. BioRxiv
  Academic article
• Zhao, Chun Mei; Rabben, Hanne-Line; Resell, Mathilde Victoria; Ianevski, Aleksandr; Sharma, Animesh; Hagen, Lars. (2024) INHIBITION OF EXOSOMES SUPPRESSES THE PROGRESSION OF PANCREATIC DUCTAL ADENOCARCINOMA: A STUDY USING MOUSE MODELS AND HUMAN ORGANOIDS. United European Gastroenterology Journal (UEG Journal)
  Article in business/trade/industry journal
• Berg, Sigrid Ravn; Demirovic, Aida; Sharma, Animesh; Hagen, Lars; Vågbø, Cathrine Broberg; Zatula, Alexey. (2024) Progression of monoclonal gammopathy of undetermined significance to multiple myeloma is associated with enhanced translational quality control and overall loss of surface antigens. Journal of Translational Medicine
  Academic article

2023

• Nymark, Marianne; Finazzi, Giovanni; Volpe, Charlotte; Serif, Manuel Philipp; Fonseca, Davi de Miranda; Sharma, Animesh. (2023) Loss of CpFTSY Reduces Photosynthetic Performance and Affects Insertion of PsaC of PSI in Diatoms. Plant and Cell Physiology
  Academic article
• Gederaas, Odrun Arna; Sharma, Animesh; Mbarak, Saide; Sporsheim, Bjørnar; Høgset, Anders; Bogoeva, Vanya. (2023) Proteomic analysis reveals mechanisms underlying increased efficacy of bleomycin by photochemical internalization in bladder cancer cells. Molecular Omics
  Academic article

2022

• Røst, Lisa M.; Ræder, Synnøve Brandt; Olaisen, Camilla; Søgaard, Caroline Krogh; Sharma, Animesh; Bruheim, Per. (2022) PCNA regulates primary metabolism by scaffolding metabolic enzymes. Oncogene
  Academic article
• Høiem, Therese Stork; Andersen, Maria Karoline; Martin-Lorenzo, Marta; Longuespée, Rémi; Claes, Britt S.R.; Nordborg, Anna. (2022) An optimized MALDI MSI protocol for spatial detection of tryptic peptides in fresh frozen prostate tissue. Proteomics
  Academic article
• Coron, Abba Elizabeth; Fonseca, Davi de Miranda; Sharma, Animesh; Slupphaug, Geir; Strand, Berit Løkensgard; Rokstad, Anne Mari A.. (2022) MS-proteomics provides insight into the host responses towards alginate microspheres. Materials Today Bio
  Academic article

2021

• Alves, Christiano R. R.; Eichelberger, Eric J.; Neves, Willian das; Ribeiro, Márcio A. C.; Bechara, Luiz R.G.; Voltarelli, Vanessa A.. (2021) Cancer-induced muscle atrophy is determined by intrinsic muscle oxidative capacity. The FASEB Journal
  Academic article
• Nymark, Marianne; Hafskjold, Marthe Caroline Grønbech; Volpe, Charlotte; Fonseca, Davi de Miranda; Sharma, Animesh; Tsirvouli, Eirini. (2021) Functional studies of CpSRP54 in diatoms show that the mechanism of thylakoid protein insertion differs from that in plants and green algae. The Plant Journal
  Academic article
• Pinto, Sneha M.; Kim, Hera; Subbannayya, Yashwanth; Giambelluca, Miriam S.; Bösl, Korbinian; Ryan, Liv. (2021) Comparative Proteomic Analysis Reveals Varying Impact on Immune Responses in Phorbol 12-Myristate-13-Acetate-Mediated THP-1 Monocyte-to-Macrophage Differentiation. Frontiers in Immunology
  Academic article
• Sumabe, Balagra Kasim; Ræder, Synnøve Brandt; Røst, Lisa M.; Sharma, Animesh; Donkor, Eric S.; Mosi, Lydia. (2021) Nucleoside Analogues Are Potent Inducers of Pol V-mediated Mutagenesis. Biomolecules
  Academic article
• Wang, Qiong; Karvelsson, Sigurdur Trausti; Johannsson, Freyr; Vilhjalmsson, Arnar Ingi; Hagen, Lars; Fonseca, Davi de Miranda. (2021) UDP-glucose dehydrogenase expression is upregulated following EMT and differentially affects intracellular glycerophosphocholine and acetylaspartate levels in breast mesenchymal cell lines. Molecular Oncology
  Academic article
• Alswady-Hoff, Mayes; Erdem, Johanna Maria Samulin; Phuyal, Santosh; Knittelfelder, Oskar; Sharma, Animesh; Fonseca, Davi de Miranda. (2021) Long-Term Exposure to Nanosized TiO2 Triggers Stress Responses and Cell Death Pathways in Pulmonary Epithelial Cells. International Journal of Molecular Sciences
  Academic article
• Iveland, Tobias S.; Hagen, Lars; Sharma, Animesh; Sousa, Mirta M. L.; Sarno, Antonio; Wollen, Kristian Lied. (2021) Correction to: HDACi mediate UNG2 depletion, dysregulated genomic uracil and altered expression of oncoproteins and tumor suppressors in B- and T-cell lines (Journal of Translational Medicine, (2020), 18, 1, (159), 10.1186/s12967-020-02318-8). Journal of Translational Medicine
  Errata
• Steen, Kristian Wollen; Hagen, Lars; Vågbø, Cathrine Broberg; Rabe, Renana; Iveland, Tobias Solli; Aas, Per Arne. (2021) ALKBH3 partner ASCC3 mediates P-body formation and selective clearance of MMS-induced 1-methyladenosine and 3-methylcytosine from mRNA. Journal of Translational Medicine
  Academic article

2020

• Iveland, Tobias Solli; Hagen, Lars; Sharma, Animesh; Sousa, Mirta; Sarno, Antonio; Wollen, Kristian Lied. (2020) HDACi Mediate UNG2 Depletion, Dysregulated Genomic Uracil and Altered Expression of Oncoproteins and Tumor Suppressors in B- And T-cell Lines. Journal of Translational Medicine
  Academic article
• Alves, Christiano R. R.; Neves, Willian des; Almeida, Ney R de; Eichelberger, Eric J; Jannig, Paulo R.; Voltarelli, Vanessa A. (2020) Exercise training reverses cancer-induced oxidative stress and decrease in muscle COPS2/TRIP15/ALIEN. Molecular Metabolism
  Academic article
• Louwe, Maria Cornelia; Olsen, Maria Belland; Kaasbøll, Ole Jørgen; Yang, Kuan; Fosshaug, Linn Elisabeth Lillerud; Alfsnes, Katrine. (2020) Absence of NLRP3 Inflammasome in Hematopoietic Cells Reduces Adverse Remodeling After Experimental Myocardial Infarction. JACC: Basic to Translational Science
  Academic article
• Nymark, Marianne; Hafskjold, Marthe Caroline Grønbech; Volpe, Charlotte; Fonseca, Davi de Miranda; Sharma, Animesh; Tsirvouli, Eirini. (2020) Functional studies of CpSRP54 in diatoms show that the mechanism of thylakoid protein insertion differ from that in plants and green algae. The Plant Journal
  Academic article

2019

• Toraskar, Jimita Prashant; Magnussen, Synnøve Norvoll; Hagen, Lars; Sharma, Animesh; Hoang, Linh; Bjørkøy, Geir. (2019) A Novel Truncated Form of Nephronectin Is Present in Small Extracellular Vesicles Isolated from 66cl4 Cells. Journal of Proteome Research
  Academic article
• Søgaard, Caroline Krogh; Nepal, Anala; Petrovic, Voin; Sharma, Animesh; Liabakk, Nina-Beate; Steigedal, Tonje S.. (2019) Targeting the non-canonical roles of PCNA modifies and increases the response to targeted anti-cancer therapy. OncoTarget
  Academic article

2018

• Zhao, Chun-Mei; Rabben, Hanne-Line; Zhu, Yanping; Olsen, Magnus Kringstad; Wang, Zhiqiang; Hao, Yanpeng. (2018) 390 - A New Treatment for Pancreatic Cancer: Targeting Nervecancer Cell Crosstalk. Gastroenterology
  Abstract
• Souza, Rodrigo W. A.; Alves, Christiano R. R.; Medeiros, Alessandra; Rolim, Natale Pinheiro Lage; Silva, Gustavo Jose Justo; Moreira, Jose Bianco Nascimento. (2018) Differential regulation of cysteine oxidative post-translational modifications in high and low aerobic capacity. Scientific Reports
  Academic article
• Phuyal, Santosh; Kasem, Mayes; Knittelfelder, Oskar; Sharma, Animesh; Fonseca, Davi de Miranda; Vebraite, Vaineta. (2018) Characterization of the proteome and lipidome profiles of human lung cells after low dose and chronic exposure to multiwalled carbon nanotubes. Nanotoxicology
  Academic article

2017

• Zatula, Alexey; Dikic, Aida; Mulder, Teska Celine; Sharma, Animesh; Vågbø, Cathrine Broberg; Sousa, Mirta. (2017) Proteome alterations associated with transformation of multiple myeloma to secondary plasma cell leukemia. OncoTarget
  Academic article
• Zienolddiny, Shanbeh; Phuyal, Santosh; Kasem, Mayes; Knittelfelder, Oskar; Sharma, Animesh; Fonseca, Davi de Miranda. (2017) Toxicoproteomic effects of carbon nanotubes on chronically exposed human lung cells. Toxicology Letters
  Abstract
• Petrovic, Voin; Olaisen, Camilla; Sharma, Animesh; Nepal, Anala; Bugge, Steffen; Sundby, Eirik. (2017) Changes in cellular signaling proteins in extracts from A549, H460, and U2OS cells treated with cisplatin or docetaxel. Data in Brief
  Academic article
• Pinho, Maria; Scrimgeour, Nathan Robert; Stølen, Tomas; Garten, Karin; Sharma, Animesh; Fonseca, Davi de Miranda. (2017) Modeling of cardiac ischaemia and reperfusion injury: a human-based in vitro model using iPS-derived cardiomyocytes. European Heart Journal
  Abstract
• Bjørås, Karine; Sousa, Mirta; Sharma, Animesh; Fonseca, Davi de Miranda; Søgaard, Caroline Danielsen; Bjørås, Magnar. (2017) Monitoring of the spatial and temporal dynamics of BER/SSBR pathway proteins, including MYH, UNG2, MPG, NTH1 and NEIL1-3, during DNA replication. Nucleic Acids Research (NAR)
  Academic article
• Petrovic, Voin; Olaisen, Camilla; Sharma, Animesh; Nepal, Anala; Bugge, Steffen; Sundby, Eirik. (2017) On-column trypsinization allows for re-use of matrix in modified multiplexed inhibitor beads assay. Analytical Biochemistry
  Academic article

2016

• Skarpengland, Tonje; Dahl, Tuva Børresdatter; Skjelland, Mona; Scheffler, Katja; Sousa, Mirta; Gregersen, Ida. (2016) Enhanced base excision repair capacity in carotid atherosclerosis may protect nuclear DNA but not mitochondrial DNA. Free Radical Biology & Medicine
  Academic article
• Helander, Linda; Sharma, Animesh; Krokan, Hans Einar; Plaetzer, Kristjan; Krammer, Barbara; Tortik, Nicole. (2016) Photodynamic treatment with hexyl-aminolevulinate mediates reversible thiol oxidation in core oxidative stress signaling proteins. Molecular Biosystems
  Academic article

2015

• Zub, Kamila; Sousa, Mirta; Sarno, Antonio; Sharma, Animesh; Dikic, Aida; Rao, Shalini. (2015) Modulation of cell metabolic pathways and oxidative stress signaling contribute to acquired Melphalan resistance in multiple myeloma cells. PLOS ONE
  Academic article

2014

• Hagen, Lars; Sharma, Animesh; Aas, Per Arne; Slupphaug, Geir. (2014) Off-target responses in the HeLa proteome subsequent to transient plasmid-mediated transfection. Biochimica et Biophysica Acta - Proteins and Proteomics
  Academic article

2012

• Sridhar, Settu; Sharma, Animesh; Kongshaug, Heidi; Nilsen, Frank; Jonassen, Inge. (2012) Whole genome sequencing of the fish pathogen Francisella noatunensis subsp. orientalis Toba04 gives novel insights into Francisella evolution and pathogenecity. BMC Genomics
  Academic article

2011

• Kamil, Atif; Falk, Knut; Sharma, Animesh; Raae, Arnt Johan; Berven, Frode; Koppang, Erling Olaf. (2011) A monoclonal antibody distinguishes between two IgM heavy chain isotypes in Atlantic salmon and brown trout: Protein characterization, 3D modeling and epitope mapping. Molecular Immunology
  Academic article
• Star, Bastiaan; Nederbragt, Alexander Johan; Jentoft, Sissel; Grimholt, Unni; Malmstrøm, Martin; Gregers, Tone Fredsvik. (2011) The genome sequence of Atlantic cod reveals a unique immune system. Nature
  Academic article
• Tadiso, Tariku Markos; Sharma, Animesh; Hordvik, Ivar. (2011) Analysis of polymeric immunoglobulin receptor- and CD300-like molecules from Atlantic salmon. Molecular Immunology
  Academic article

2010

• Balzer, Susanne; Malde, Ketil; Lanzén, Anders; Sharma, Animesh; Jonassen, Inge. (2010) Characteristics of 454 pyrosequencing data-enabling realistic simulation with flowsim. Bioinformatics
  Academic article

2008

• Joshi, Mohan; Sharma, Animesh; Kant, Sashi; Birah, Ajanta; Gupta, Gorakh Prasad; Khan, Sharik R.. (2008) An Insecticidal GroEL Protein with Chitin Binding Activity from Xenorhabdus nematophila. Journal of Biological Chemistry
  Academic article
• Pal, Nikhil Ranja; Sharma, Animesh; Sanadhya, Somitra Kumar. (2008) Deriving meaningful rules from gene expression data for classification. Journal of Intelligent & Fuzzy Systems: Applications in Engineering and Technology
  Academic article

2007

• Pal, Nikhil; Aguan, Kripamoy; Sharma, Animesh; Amari, Shun-ichi. (2007) Discovering biomarkers from gene expression data for predicting cancer subgroups using neural networks and relational fuzzy clustering. BMC Bioinformatics
  Academic article