2026

• Yang, Mingyi; Wang, Wei; Camara Quilez, Maria; Farsund, Borghild Hvesser; Andersen, Niklas Nonboe; Garten, Karin; Sharma, Animesh; Lin, Xiaolin; Åmellem, Ingrid; Ravlo, Erlend. (2026) Modeling CLN3 Batten disease in astrocytes reveals alterations in mitochondria homeostasis, fatty acid metabolism and oxidative stress response. Journal of Biomedical Science
  Academic article
• Kaththriarachchi, Sonali Nadeeshani; Kommisrud, Elisabeth; Grevle, Inger S.; Santana, João; Eriksen, Anne Lene; Narud, Birgitte; Sharma, Animesh; Hagen, Lars; Bremer, Joanna; Hansen, Bjørn Henrik. (2026) Combined physicochemical and proteomic profiling identifies biochemical associations of oocyte quality and fertilisation outcome in Atlantic salmon (Salmo salar L.). Aquaculture
  Academic article

2025

• Eidsaa, Marius; Sharma, Animesh; Janasch, Markus; Kuch, Alicja; Skoczyńska, Anna; Di Bartolomeo, Francesca. (2025) Proteomic landscape of imipenem resistance in Pseudomonas aeruginosa: a comparative investigation between clinical and control strains. Frontiers in Cellular and Infection Microbiology
  Academic article
• Kaarbø, Mari; Yang, Mingyi; Meyer-Myklestad, Malin Holm; Sundaram, Arvind; Sousa, Mirta; Sharma, Animesh; Medhus, Asle Wilhelm; Riise, Anne Ma Dyrhol-; Kvale, Dag; Hov, Johannes Espolin Roksund. (2025) Transcriptomic and proteomic profiling reveal immune and metabolic dysregulation in the colonic mucosa of people living with HIV with incomplete immune recovery. Frontiers in Immunology
  Academic article
• Berg, Sigrid Ravn; Brambilla, Alessandro; Hagen, Lars; Sharma, Animesh; Vågbø, Cathrine Broberg; Liabakk, Nina-Beate; Kissova, Miroslava; Barenys, Miquel Arano; Bjørås, Magnar; Torp, Sverre Helge. (2025) Proteomic Analysis Uncovers Enhanced Inflammatory Phenotype and Distinct Metabolic Changes in IDH1 Mutant Glioma Cells. International Journal of Molecular Sciences
  Academic article
• Videm, Vibeke; Sharma, Animesh; Dahl, Torbjørn. (2025) Complement and diverse enrichment of antibodies in intraluminal thrombi from abdominal aortic aneurysms may contribute to increased inflammation. Scientific Reports
  Academic article
• Iveland, Tobias Solli; Hagen, Lars; Sousa, Mirta; Liabakk, Nina-Beate; Aas, Per Arne; Sharma, Animesh; Kavli, Bodil Merete; Slupphaug, Geir. (2025) Cytotoxic mechanisms of pemetrexed and HDAC inhibition in non-small cell lung cancer cells involving ribonucleotides in DNA. Scientific Reports
  Academic article
• Resell, Mathilde Victoria; Rabben, Hanne-Line; Sharma, Animesh; Hagen, Lars; Hoang, Linh; Skogaker, Nan Elisabeth Tostrup; Aarvik, Anne; Bjåstad, Eirik Knudsen; Svensson, Magnus Kringstad; Amrutkar, Manoj. (2025) Proteomics profiling of research models for studying pancreatic ductal adenocarcinoma. Scientific Data
  Academic article
• Resell, Mathilde Victoria; Rabben, Hanne-Line; Sharma, Animesh; Hagen, Lars; Hoang, Linh; Tostrup-Skogaker, Nan; Aarvik, Anne. (2025) PROTEOMICS PROFILING OF RESEARCH MODELS FOR STUDYING PANCREATIC DUCTAL ADENOCARCINOMA. Scientific Data
  Professional article
• Resell, Mathilde Victoria; Graarud, Elisabeth Pimpisa; Rabben, Hanne-Line; Sharma, Animesh; Hagen, Lars; Hoang, Linh; Skogaker, Nan Elisabeth Tostrup; Aarvik, Anne; Svensson, Magnus Kringstad; Amrutkar, Manoj. (2025) Knowledge Discovery in Databases of Proteomics by Systems Modeling in Translational Research on Pancreatic Cancer. Proteomes
  Academic article

2024

• Farjami, Toktam; Sharma, Animesh; Jensen, Ida-Johanne; Falch, Eva. (2024) A proteomics–bioinformatics approach to assess the molecular and physicochemical properties of brewer's spent grain protein concentrates: Effect of alkali-heat treatment. Journal of Agriculture and Food Research
  Academic article
• Farjami, Toktam; Sharma, Animesh; Hagen, Lars; Jensen, Ida-Johanne; Falch, Eva. (2024) Comparative study on composition and functional properties of brewer's spent grain proteins precipitated by citric acid and hydrochloric acid. Food Chemistry
  Academic article
• Olaisen, Camilla; Røst, Lisa M.; Sharma, Animesh; Søgaard, Caroline Krogh; Khong, Tiffany; Berg, Sigrid Ravn; Jang, Mi; Nedal, Aina; Spencer, Andrew; Bruheim, Per. (2024) Multiple Myeloma Cells with Increased Proteasomal and ER Stress Are Hypersensitive to ATX-101, an Experimental Peptide Drug Targeting PCNA. Cancers
  Academic article
• Eidsaa, Marius; Sharma, Animesh; Janasch, Markus; Skoczyńska, Anna; Di Bartolomeo, Francesca; Kuch, Alicja. (2024) Unravelling the Proteomic Landscape of Imipenem Resistance in Pseudomonas aeruginosa: A Comparative Investigation between Clinical and Control Strains. BioRxiv
  Academic article
• Zhao, Chun Mei; Rabben, Hanne-Line; Resell, Mathilde Victoria; Ianevski, Aleksandr; Sharma, Animesh; Hagen, Lars; Diez Sanchez, Alberto; Martin Alonso, Mara; Qvigstad, Gunnar; Kainov, Denis. (2024) INHIBITION OF EXOSOMES SUPPRESSES THE PROGRESSION OF PANCREATIC DUCTAL ADENOCARCINOMA: A STUDY USING MOUSE MODELS AND HUMAN ORGANOIDS. United European Gastroenterology Journal (UEG Journal)
  Professional article
• Berg, Sigrid Ravn; Demirovic, Aida; Sharma, Animesh; Hagen, Lars; Vågbø, Cathrine Broberg; Zatula, Alexey; Misund, Kristine; Waage, Anders; Slupphaug, Geir. (2024) Progression of monoclonal gammopathy of undetermined significance to multiple myeloma is associated with enhanced translational quality control and overall loss of surface antigens. Journal of Translational Medicine
  Academic article

2023

• Nymark, Marianne; Finazzi, Giovanni; Volpe, Charlotte; Serif, Manuel Philipp; Fonseca, Davi de Miranda; Sharma, Animesh; Sanchez Puerto, Nicolas; Sharma, Amit Kumar; Ashcroft, Felicity Jayne; Kissen, Ralph. (2023) Loss of CpFTSY Reduces Photosynthetic Performance and Affects Insertion of PsaC of PSI in Diatoms. Plant and Cell Physiology
  Academic article
• Gederaas, Odrun Arna; Sharma, Animesh; Mbarak, Saide; Sporsheim, Bjørnar; Høgset, Anders; Bogoeva, Vanya; Slupphaug, Geir; Hagen, Lars. (2023) Proteomic analysis reveals mechanisms underlying increased efficacy of bleomycin by photochemical internalization in bladder cancer cells. Molecular Omics
  Academic article

2022

• Røst, Lisa M.; Ræder, Synnøve Brandt; Olaisen, Camilla; Søgaard, Caroline Krogh; Sharma, Animesh; Bruheim, Per; Otterlei, Marit. (2022) PCNA regulates primary metabolism by scaffolding metabolic enzymes. Oncogene
  Academic article
• Høiem, Therese Stork; Andersen, Maria Karoline; Martin-Lorenzo, Marta; Longuespée, Rémi; Claes, Britt S.R.; Nordborg, Anna; Dewez, Frédéric; Balluff, Benjamin; Giampà , Marco; Sharma, Animesh. (2022) An optimized MALDI MSI protocol for spatial detection of tryptic peptides in fresh frozen prostate tissue. Proteomics
  Academic article
• Coron, Abba Elizabeth; Fonseca, Davi de Miranda; Sharma, Animesh; Slupphaug, Geir; Strand, Berit Løkensgard; Rokstad, Anne Mari A.. (2022) MS-proteomics provides insight into the host responses towards alginate microspheres. Materials Today Bio
  Academic article

2021

• Alves, Christiano R. R.; Eichelberger, Eric J.; Neves, Willian das; Ribeiro, Márcio A. C.; Bechara, Luiz R.G.; Voltarelli, Vanessa A.; Almeida, Ney R. de; Hagen, Lars; Sharma, Animesh; Ferreira, Julio C. B.. (2021) Cancer-induced muscle atrophy is determined by intrinsic muscle oxidative capacity. The FASEB Journal
  Academic article
• Nymark, Marianne; Hafskjold, Marthe Caroline Grønbech; Volpe, Charlotte; Fonseca, Davi de Miranda; Sharma, Animesh; Tsirvouli, Eirini; Winge, Per; Finazzi, Giovanni; Bones, Atle Magnar. (2021) Functional studies of CpSRP54 in diatoms show that the mechanism of thylakoid protein insertion differs from that in plants and green algae. The Plant Journal
  Academic article
• Pinto, Sneha M.; Kim, Hera; Subbannayya, Yashwanth; Giambelluca, Miriam S.; Bösl, Korbinian; Ryan, Liv; Sharma, Animesh; Kandasamy, Richard Kumaran. (2021) Comparative Proteomic Analysis Reveals Varying Impact on Immune Responses in Phorbol 12-Myristate-13-Acetate-Mediated THP-1 Monocyte-to-Macrophage Differentiation. Frontiers in Immunology
  Academic article
• Sumabe, Balagra Kasim; Ræder, Synnøve Brandt; Røst, Lisa M.; Sharma, Animesh; Donkor, Eric S.; Mosi, Lydia; Duodu, Samuel; Bruheim, Per; Otterlei, Marit. (2021) Nucleoside Analogues Are Potent Inducers of Pol V-mediated Mutagenesis. Biomolecules
  Academic article
• Wang, Qiong; Karvelsson, Sigurdur Trausti; Johannsson, Freyr; Vilhjalmsson, Arnar Ingi; Hagen, Lars; Fonseca, Davi de Miranda; Sharma, Animesh; Slupphaug, Geir; Rolfsson, Ottar. (2021) UDP-glucose dehydrogenase expression is upregulated following EMT and differentially affects intracellular glycerophosphocholine and acetylaspartate levels in breast mesenchymal cell lines. Molecular Oncology
  Academic article
• Alswady-Hoff, Mayes; Erdem, Johanna Maria Samulin; Phuyal, Santosh; Knittelfelder, Oskar; Sharma, Animesh; Fonseca, Davi de Miranda; Skare, Øivind; Slupphaug, Geir; Zienolddiny, Shanbeh. (2021) Long-Term Exposure to Nanosized TiO2 Triggers Stress Responses and Cell Death Pathways in Pulmonary Epithelial Cells. International Journal of Molecular Sciences
  Academic article
• Iveland, Tobias S.; Hagen, Lars; Sharma, Animesh; Sousa, Mirta M. L.; Sarno, Antonio; Wollen, Kristian Lied; Liabakk, Nina-Beate; Slupphaug, Geir. (2021) Correction to: HDACi mediate UNG2 depletion, dysregulated genomic uracil and altered expression of oncoproteins and tumor suppressors in B- and T-cell lines (Journal of Translational Medicine, (2020), 18, 1, (159), 10.1186/s12967-020-02318-8). Journal of Translational Medicine
  Corrigendum
• Steen, Kristian Wollen; Hagen, Lars; Vågbø, Cathrine Broberg; Rabe, Renana; Iveland, Tobias Solli; Aas, Per Arne; Sharma, Animesh; Sporsheim, Bjørnar; Erlandsen, Hilde; Palibrk, Vuk. (2021) ALKBH3 partner ASCC3 mediates P-body formation and selective clearance of MMS-induced 1-methyladenosine and 3-methylcytosine from mRNA. Journal of Translational Medicine
  Academic article

2020

• Iveland, Tobias Solli; Hagen, Lars; Sharma, Animesh; Sousa, Mirta; Sarno, Antonio; Wollen, Kristian Lied; Liabakk, Nina-Beate; Slupphaug, Geir. (2020) HDACi Mediate UNG2 Depletion, Dysregulated Genomic Uracil and Altered Expression of Oncoproteins and Tumor Suppressors in B- And T-cell Lines. Journal of Translational Medicine
  Academic article
• Alves, Christiano R. R.; Neves, Willian des; Almeida, Ney R de; Eichelberger, Eric J; Jannig, Paulo R.; Voltarelli, Vanessa A; Tobias, Gabriel C; Bechara, Luiz R G; Faria, Daniele de Paula; Alves, Maria J N. (2020) Exercise training reverses cancer-induced oxidative stress and decrease in muscle COPS2/TRIP15/ALIEN. Molecular Metabolism
  Academic article
• Louwe, Maria Cornelia; Olsen, Maria Belland; Kaasbøll, Ole Jørgen; Yang, Kuan; Fosshaug, Linn Elisabeth Lillerud; Alfsnes, Katrine; Øgaard, Jonas; Rashidi, Azita; Skulberg, Vidar Magne; Yang, Mingyi. (2020) Absence of NLRP3 Inflammasome in Hematopoietic Cells Reduces Adverse Remodeling After Experimental Myocardial Infarction. JACC: Basic to Translational Science
  Academic article
• Nymark, Marianne; Hafskjold, Marthe Caroline Grønbech; Volpe, Charlotte; Fonseca, Davi de Miranda; Sharma, Animesh; Tsirvouli, Eirini; Serif, Manuel; Winge, Per; Finazzi, Giovanni; Bones, Atle M.. (2020) Functional studies of CpSRP54 in diatoms show that the mechanism of thylakoid protein insertion differ from that in plants and green algae. The Plant Journal
  Academic article

2019

• Toraskar, Jimita Prashant; Magnussen, Synnøve Norvoll; Hagen, Lars; Sharma, Animesh; Hoang, Linh; Bjørkøy, Geir; Svineng, Gunbjørg; Steigedal, Tonje S.. (2019) A Novel Truncated Form of Nephronectin Is Present in Small Extracellular Vesicles Isolated from 66cl4 Cells. Journal of Proteome Research
  Academic article
• Søgaard, Caroline Krogh; Nepal, Anala; Petrovic, Voin; Sharma, Animesh; Liabakk, Nina-Beate; Steigedal, Tonje S.; Otterlei, Marit. (2019) Targeting the non-canonical roles of PCNA modifies and increases the response to targeted anti-cancer therapy. OncoTarget
  Academic article

2018

• Zhao, Chun-Mei; Rabben, Hanne-Line; Zhu, Yanping; Olsen, Magnus Kringstad; Wang, Zhiqiang; Hao, Yanpeng; Cai, Xing; Fonseca, Davi de Miranda; Sharma, Animesh; Li, Mingna. (2018) 390 - A New Treatment for Pancreatic Cancer: Targeting Nervecancer Cell Crosstalk. Gastroenterology
  Conference abstract
• Souza, Rodrigo W. A.; Alves, Christiano R. R.; Medeiros, Alessandra; Rolim, Natale Pinheiro Lage; Silva, Gustavo Jose Justo; Bianco Nascimento Moreira, Jose; Alves, Marcia Netto Magalhaes; Wohlwend, Martin; Gebriel, Mohammed; Hagen, Lars. (2018) Differential regulation of cysteine oxidative post-translational modifications in high and low aerobic capacity. Scientific Reports
  Academic article
• Phuyal, Santosh; Kasem, Mayes; Knittelfelder, Oskar; Sharma, Animesh; Fonseca, Davi de Miranda; Vebraite, Vaineta; Shaposhnikov, Sergey; Slupphaug, Geir; Skaug, Vidar; Zienolddiny, Shanbeh. (2018) Characterization of the proteome and lipidome profiles of human lung cells after low dose and chronic exposure to multiwalled carbon nanotubes. Nanotoxicology
  Academic article

2017

• Zatula, Alexey; Dikic, Aida; Mulder, Teska Celine; Sharma, Animesh; Vågbø, Cathrine Broberg; Sousa, Mirta; Waage, Anders; Slupphaug, Geir. (2017) Proteome alterations associated with transformation of multiple myeloma to secondary plasma cell leukemia. OncoTarget
  Academic article
• Zienolddiny, Shanbeh; Phuyal, Santosh; Kasem, Mayes; Knittelfelder, Oskar; Sharma, Animesh; Fonseca, Davi de Miranda; Vebraite, Vaineta; Shaposhnikov, Sergey. (2017) Toxicoproteomic effects of carbon nanotubes on chronically exposed human lung cells. Toxicology Letters
  Conference abstract
• Petrovic, Voin; Olaisen, Camilla; Sharma, Animesh; Nepal, Anala; Bugge, Steffen; Sundby, Eirik; Hoff, Bård Helge; Slupphaug, Geir; Otterlei, Marit. (2017) Changes in cellular signaling proteins in extracts from A549, H460, and U2OS cells treated with cisplatin or docetaxel. Data in Brief
  Academic article
• Pinho, Maria; Scrimgeour, Nathan Robert; Stølen, Tomas; Garten, Karin; Sharma, Animesh; Fonseca, Davi de Miranda; Smith, Godfrey L; Høydal, Morten. (2017) Modeling of cardiac ischaemia and reperfusion injury: a human-based in vitro model using iPS-derived cardiomyocytes. European Heart Journal
  Conference abstract
• Bjørås, Karine; Sousa, Mirta; Sharma, Animesh; Fonseca, Davi de Miranda; Søgaard, Caroline Danielsen; Bjørås, Magnar; Otterlei, Marit. (2017) Monitoring of the spatial and temporal dynamics of BER/SSBR pathway proteins, including MYH, UNG2, MPG, NTH1 and NEIL1-3, during DNA replication. Nucleic Acids Research (NAR)
  Academic article
• Petrovic, Voin; Olaisen, Camilla; Sharma, Animesh; Nepal, Anala; Bugge, Steffen; Sundby, Eirik; Hoff, Bård Helge; Slupphaug, Geir; Otterlei, Marit. (2017) On-column trypsinization allows for re-use of matrix in modified multiplexed inhibitor beads assay. Analytical Biochemistry
  Academic article

2016

• Skarpengland, Tonje; Dahl, Tuva Børresdatter; Skjelland, Mona; Scheffler, Katja; Sousa, Mirta; Gregersen, Ida; Kusnierczyk, Anna; Sharma, Animesh; Slupphaug, Geir; Eide, Lars. (2016) Enhanced base excision repair capacity in carotid atherosclerosis may protect nuclear DNA but not mitochondrial DNA. Free Radical Biology & Medicine
  Academic article
• Helander, Linda; Sharma, Animesh; Krokan, Hans Einar; Plaetzer, Kristjan; Krammer, Barbara; Tortik, Nicole; Gederaas, Odrun Arna; Slupphaug, Geir; Hagen, Lars. (2016) Photodynamic treatment with hexyl-aminolevulinate mediates reversible thiol oxidation in core oxidative stress signaling proteins. Molecular Biosystems
  Academic article

2015

• Zub, Kamila; Sousa, Mirta; Sarno, Antonio; Sharma, Animesh; Dikic, Aida; Rao, Shalini; Young, Clifford; Aas, Per Arne; Ericsson, Ida; Sundan, Anders. (2015) Modulation of cell metabolic pathways and oxidative stress signaling contribute to acquired Melphalan resistance in multiple myeloma cells. PLOS ONE
  Academic article

2014

• Hagen, Lars; Sharma, Animesh; Aas, Per Arne; Slupphaug, Geir. (2014) Off-target responses in the HeLa proteome subsequent to transient plasmid-mediated transfection. Biochimica et Biophysica Acta - Proteins and Proteomics
  Academic article

2012

• Sridhar, Settu; Sharma, Animesh; Kongshaug, Heidi; Nilsen, Frank; Jonassen, Inge. (2012) Whole genome sequencing of the fish pathogen Francisella noatunensis subsp. orientalis Toba04 gives novel insights into Francisella evolution and pathogenecity. BMC Genomics
  Academic article

2011

• Kamil, Atif; Falk, Knut; Sharma, Animesh; Raae, Arnt Johan; Berven, Frode; Koppang, Erling Olaf; Hordvik, Ivar. (2011) A monoclonal antibody distinguishes between two IgM heavy chain isotypes in Atlantic salmon and brown trout: Protein characterization, 3D modeling and epitope mapping. Molecular Immunology
  Academic article
• Star, Bastiaan; Nederbragt, Alexander Johan; Jentoft, Sissel; Grimholt, Unni; Malmstrøm, Martin; Gregers, Tone Fredsvik; Rounge, Trine Ballestad; Paulsen, Jonas; Solbakken, Monica Hongrø; Sharma, Animesh. (2011) The genome sequence of Atlantic cod reveals a unique immune system. Nature
  Academic article
• Tadiso, Tariku Markos; Sharma, Animesh; Hordvik, Ivar. (2011) Analysis of polymeric immunoglobulin receptor- and CD300-like molecules from Atlantic salmon. Molecular Immunology
  Academic article

2010

• Balzer, Susanne; Malde, Ketil; Lanzén, Anders; Sharma, Animesh; Jonassen, Inge. (2010) Characteristics of 454 pyrosequencing data-enabling realistic simulation with flowsim. Bioinformatics
  Academic article

2008

• Joshi, Mohan; Sharma, Animesh; Kant, Sashi; Birah, Ajanta; Gupta, Gorakh Prasad; Khan, Sharik R.; Bhatnagar, Rakesh; Bhatnagar, Nirupama. (2008) An Insecticidal GroEL Protein with Chitin Binding Activity from Xenorhabdus nematophila. Journal of Biological Chemistry
  Academic article
• Pal, Nikhil Ranja; Sharma, Animesh; Sanadhya, Somitra Kumar. (2008) Deriving meaningful rules from gene expression data for classification. Journal of Intelligent & Fuzzy Systems: Applications in Engineering and Technology
  Academic article

2007

• Pal, Nikhil; Aguan, Kripamoy; Sharma, Animesh; Amari, Shun-ichi. (2007) Discovering biomarkers from gene expression data for predicting cancer subgroups using neural networks and relational fuzzy clustering. BMC Bioinformatics
  Academic article