Journal publications

• Folkesson, Evelina; Niederdorfer, Barbara; To, Vu; Thommesen, Liv; Klinkenberg, Geir; Lægreid, Astrid; Flobak, Åsmund. (2020) High-throughput screening reveals higher synergistic effect of MEK inhibitor combinations in colon cancer spheroids. Scientific Reports. vol. 10.
• Niederdorfer, Barbara; Touré, Vasundra; Vazques, Miguel; Thommesen, Liv; Kuiper, Martin Tremen R.; Lægreid, Astrid; Flobak, Åsmund. (2020) Strategies to Enhance Logic Modeling-Based Cell Line-Specific Drug Synergy Prediction. Frontiers in Physiology. vol. 11.
• Flobak, Åsmund; Niederdorfer, Barbara; To, Vu; Thommesen, Liv; Klinkenberg, Geir; Lægreid, Astrid. (2019) A high-throughput drug combination screen of targeted small molecule inhibitors in cancer cell lines. Scientific Data. vol. 6.
• Menden, Michael Patrick; Wang, Dennis; Mason, Mike J.; Szalai, Bence; Bulusu, Krishna C.; Guan, Yuanfang; Flobak, Åsmund; Kuiper, Martin; Lægreid, Astrid; Thommesen, Liv. (2019) Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen. Nature Communications. vol. 10 (2674).
• Mjelle, Robin; Sjursen, Wenche; Thommesen, Liv; Sætrom, Pål; Hofsli, Eva. (2019) Small RNA expression from viruses, bacteria and human miRNAs in colon cancer tissue and its association with microsatellite instability and tumor location. BMC Cancer. vol. 19 (1).
• Cobo, Isidoro; Martinelli, Paola; Flández, Marta; Bakiri, Latifa; Zhang, Mingfeng; Carrillo-de-Santa-Pau, Enrique; Jia, Jinping; Lobo, Víctor J. Sánchez-Arévalo; Megías, Diego; Felipe, Irene; del Pozo, Natalia; Millán, Irene; Thommesen, Liv; Bruland, Torunn; Olson, Sara H.; Smith, Jill; Schoonjans, Kristina; Bamlet, William R.; Petersen, Gloria M.; Malats, Núria; Amundadóttir, Laufey T.; Wagner, Erwin F.; Real, Francisco X.. (2018) Transcriptional regulation by NR5A2 links differentiation and inflammation in the pancreas. Nature. vol. 554 (7693).
• Mjelle, Robin; Sellæg, Kjersti; Sætrom, Pål; Thommesen, Liv; Sjursen, Wenche; Hofsli, Eva. (2017) Identification of metastasis-associated microRNAs in serum from rectal cancer patients. OncoTarget. vol. 8 (52).
• Rao, Shalini; Solum, Guri; Niederdorfer, Barbara; Nørsett, Kristin; Bjørkøy, Geir; Thommesen, Liv. (2017) Gastrin activates autophagy and increases migration and survival of gastric adenocarcinoma cells. BMC Cancer. vol. 17:68.
• Bhandari, Sabin; Bakke, Ingunn; Kumar, J. Dinesh; Beisvag, Vidar; Sandvik, Arne Kristian; Thommesen, Liv; Varro, Andrea; Nørsett, Kristin. (2016) Connective tissue growth factor is activated by gastrin and involved in gastrin-induced migration and invasion. Biochemical and Biophysical Research Communications - BBRC. vol. 475 (1).
• Fossmark, Reidar; Rao, Shalini; Mjønes, Patricia; Munkvold, Bjørn; Flatberg, Arnar; Varro, Andrea; Thommesen, Liv; Nørsett, Kristin. (2016) PAI-1 deficiency increases the trophic effects of hypergastrinemia in the gastric corpus mucosa. Peptides. vol. 79.
• Tripathi, Sushil; Vercruysse, Steven; Chawla, Konika; Christie, Karen R.; Blake, Judith A; Huntley, Rachael P.; Orchard, Sandra; Hermjakob, Henning; Thommesen, Liv; Lægreid, Astrid; Kuiper, Martin. (2016) Gene regulation knowledge commons: community action takes care of DNA binding transcription factors. Database: The Journal of Biological Databases and Curation.
• Flobak, Åsmund; Baudot, Anaïs; Remy, Elisabeth; Thommesen, Liv; Thieffry, Denis; Kuiper, Martin; Lægreid, Astrid. (2015) Discovery of Drug Synergies in Gastric Cancer Cells Predicted by Logical Modeling. PLoS Computational Biology. vol. 11 (8).
• Tripathi, Sushil; Flobak, Åsmund; Chawla, Konika; Baudot, Anaïs; Bruland, Torunn; Thommesen, Liv; Kuiper, Martin Tremen R.; Lægreid, Astrid. (2015) The gastrin and cholecystokinin receptors mediated signaling network: a scaffold for data analysis and new hypotheses on regulatory mechanisms. BMC Systems Biology. vol. 9 (40).
• Selvik, Linn-Karina M.; Rao, Shalini; Steigedal, Tonje; Haltbakk, Ildri; Misund, Kristine; Bruland, Torunn; Prestvik, Wenche S; Lægreid, Astrid; Thommesen, Liv. (2014) Salt-inducible kinase 1 (SIK1) is induced by gastrin and inhibits migration of gastric adenocarcinoma cells. PLOS ONE. vol. 9 (11).
• Chawla, Konika; Tripathi, Sushil; Thommesen, Liv; Lægreid, Astrid; Kuiper, Martin. (2013) TFcheckpoint: a curated compendium of specific DNA-binding RNA polymerase II transcription factors. Bioinformatics. vol. 29 (19).
• Hofsli, Eva; Sjursen, Wenche; Prestvik, Wenche S; Johansen, Jostein; Rye, Morten Beck; Tranø, Gerd; Wasmuth, Hans; Hatlevoll, Ingunn; Thommesen, Liv. (2013) Identification of serum microRNA profiles in colon cancer. British Journal of Cancer. vol. 108 (8).
• Johnsen, Ingvild Bjellmo; Bergstrøm, Bjarte Aune; Stiberg, Kim Andre Ha; Thommesen, Liv; Anthonsen, Marit Walbye. (2013) Inducible cAMP early repressor (ICER) is a novel regulator of RIG-I mediated IFN-beta production. Cellular Signalling. vol. 25 (9).
• Misund, Kristine; Selvik, Linn-Karina M.; Rao, Shalini; Nørsett, Kristin Gabestad; Bakke, Ingunn; Sandvik, Arne; Lægreid, Astrid; Bruland, Torunn; Prestvik, Wenche S; Thommesen, Liv. (2013) NR4A2 is regulated by Gastrin and involved in gastrin-induced migration and invasion of gastric adenocarcinoma cells. PLOS ONE. vol. 8 (9).
• Selvik, Linn-Karina M.; Fjeldbo, Christina Sæten; Flatberg, Arnar; Steigedal, Tonje; Misund, Kristine; Anderssen, Endre; Doseth, Berit; Langaas, Mette; Tripathi, Sushil; Beisvag, Vidar; Lægreid, Astrid; Thommesen, Liv; Bruland, Torunn. (2013) The duration of gastrin treatment affects global gene expression and molecular responses involved in ER stress and anti-apoptosis. BMC Genomics. vol. 14.
• Steigedal, Tonje; Prestvik, Wenche S; Selvik, Linn-Karina M.; Fjeldbo, Christina Sæten; Bruland, Torunn; Lægreid, Astrid; Thommesen, Liv. (2013) Gastrin-induced proliferation involves MEK partner 1 (MP1). In vitro Cellular & Developmental Biology-Animal. vol. 49 (3).