Scientific, academic and artistic work
A selection of recent journal publications, artistic productions, books, including book and report excerpts.
See all publications in the database
Journal publications
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Jensen, Evelyn L.;
Díez-del-Molino, David;
Gilbert, Marcus Thomas Pius;
Bertola, Laura D.;
Borges, Filipa;
Cubric-Curik, Vlatka;
de Navascués, Miguel;
Frandsen, Peter;
Heuertz, Myriam;
Hvilsom, Christina;
Jiménez-Mena, Belén;
Miettinen, Antti;
Moest, Markus;
Pečnerová, Patrícia;
Barnes, Ian;
Vernesi, Cristiano.
(2022)
Ancient and historical DNA in conservation policy.
Trends in Ecology & Evolution.
vol. 37 (5).
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Lewin, Harris A.;
Richards, Stephen;
Aiden, Erez Lieberman;
Allende, Miguel L.;
Archibald, John M.;
Bálint, Miklós;
Barker, Katharine B.;
Baumgartner, Bridget;
Belov, Katherine;
Bertorelle, Giorgio;
Blaxter, Mark L.;
Cai, Jing;
Caperello, Nicolette D.;
Carlson, Keith;
Castilla-Rubio, Juan Carlos;
Chaw, Shu-Miaw;
Chen, Lei;
Childers, Anna K.;
Coddington, Jonathan A.;
Conde, Dalia A.;
Corominas, Montserrat;
Crandall, Keith A.;
Crawford, Andrew J.;
DiPalma, Federica;
Durbin, Richard;
Ebenezer, ThankGod E.;
Edwards, Scott V.;
Fedrigo, Olivier;
Flicek, Paul;
Formenti, Giulio;
Gibbs, Richard A.;
Gilbert, Marcus Thomas Pius;
Goldstein, Melissa M.;
Graves, Jennifer Marshall;
Greely, Henry T.;
Grigoriev, Igor V.;
Hackett, Kevin J.;
Hall, Neil;
Haussler, David;
Helgen, Kristofer M.;
Hogg, Carolyn J.;
Isobe, Sachiko;
Jakobsen, Kjetill Sigurd;
Janke, Axel;
Jarvis, Erich D.;
Johnson, Warren E.;
Jones, Steven J.M.;
Karlsson, Elinor K.;
Kersey, Paul J.;
Kim, Jin-Hyoung;
Kress, W. John;
Kuraku, Shigehiro;
Lawniczak, Mara K.N.;
Leebens-Mack, James H.;
Li, Xueyan;
Lindblad-Toh, Kerstin;
Lopez, Jose V.;
Marques-Bonet, Tomas;
Liu, Xin;
Mazard, Sophie;
Mazet, Jonna A.K.;
Mazzoni, Camila J.;
Myers, Eugene W.;
O’Neill, Rachel J.;
Paez, Sadye;
Park, Hyun;
Robinson, Gene E.;
Roquet, Cristina;
Ryder, Oliver A.;
Sabir, Jamal S.M.;
Shaffer, H. Bradley;
Shank, Timothy M.;
Sherkow, Jacob S.;
Soltis, Pamela S.;
Tang, Boping;
Tedersoo, Leho;
Uliano-Silva, Marcela;
Wang, Kun;
Wei, Xiaofeng;
Wetzer, Regina;
Wilson, Julia L.;
Xu, Xun;
Yang, Huanming;
Yoder, Anne D.;
Zhang, Guojie.
(2022)
The Earth BioGenome Project 2020: Starting the clock.
Proceedings of the National Academy of Sciences of the United States of America.
vol. 119 (4).
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Lin, Jianqing;
Duchêne, David;
Carøe, Christian;
Smith, Oliver;
Ciucani, Marta Maria;
Niemann, Jonas;
Richmond, Douglas;
Greenwood, Alex D.;
MacPhee, Ross;
Zhang, Guojie;
Gopalakrishnan, Shyam;
Gilbert, Marcus Thomas Pius.
(2022)
Probing the genomic limits of de-extinction in the Christmas Island rat.
Current Biology.
vol. 32 (7).
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Neves, Ricardo A. Cardoso;
Møbjerg, Ask;
Kodama, Miyako;
Ramos-Madrigal, Jazmín;
Gilbert, Marcus Thomas Pius;
Møbjerg, Nadja.
(2022)
Differential expression profiling of heat stressed tardigrades reveals major shift in the transcriptome.
Comparative Biochemistry and Physiology A.
vol. 267.
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Rasmussen, Jacob Agerbo;
Villumsen, Kasper Rømer;
Ernst, Madeleine;
Hansen, Martin;
Forberg, Torunn;
Gopalakrishnan, Shyam;
Gilbert, Marcus Thomas Pius;
Bojesen, Anders Miki;
Kristiansen, Karstein;
Limborg, Morten Tønsberg.
(2022)
A multi-omics approach unravels metagenomic and metabolic alterations of a probiotic and synbiotic additive in rainbow trout (Oncorhynchus mykiss).
Microbiome.
vol. 10 (1).
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Agerbo Rasmussen, Jacob;
Nielsen, Martin;
Mak, Sarah Siu Tze;
Döring, Johanna;
Klincke, Franziska;
Gopalakrishnan, Shyam;
Dunn, Robert R.;
Kauer, Randolf;
Gilbert, Marcus Thomas Pius.
(2021)
eDNA-based biomonitoring at an experimental German vineyard to characterize how management regimes shape ecosystem diversity.
Environmental DNA.
vol. 3 (1).
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Alberdi, Antton;
Andersen, Sandra B.;
Limborg, Morten T.;
Dunn, Robert R.;
Gilbert, M. Thomas P..
(2021)
Disentangling host–microbiota complexity through hologenomics.
Nature reviews genetics.
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Alfano, Niccolò;
Dayaram, Anisha;
Axtner, Jan;
Tsangaras, Kyriakos;
Kampmann, Marie-Louise;
Mohamed, Azlan;
Wong, Seth T.;
Gilbert, Marcus Thomas Pius;
Wilting, Andreas;
Greenwood, Alex D..
(2021)
Non-invasive surveys of mammalian viruses using environmental DNA.
Methods in Ecology and Evolution.
vol. 12 (10).
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Andrade, Pedro;
Gazda, Małgorzata A.;
Araújo, Pedro M.;
Afonso, Sandra;
Rasmussen, Jacob A.;
Marques, Cristiana I.;
Lopes, Ricardo J.;
Gilbert, Marcus Thomas Pius;
Carneiro, Miguel.
(2021)
Molecular parallelisms between pigmentation in the avian iris and the integument of ectothermic vertebrates.
PLoS Genetics.
vol. 17 (2).
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Azevedo-Silva, D.;
Rasmussen, J.A.;
Carneiro, M.;
Gilbert, Marcus Thomas Pius;
Azevedo, H..
(2021)
Feasibility of applying shotgun metagenomic analyses to grapevine leaf, rhizosphere and soil microbiome characterisation.
Australian journal of grape and wine research.
vol. 27 (4).
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Bergeron, Lucie A.;
Besenbacher, Søren;
Bakker, Jaco;
Zheng, Jiao;
Li, Panyi;
Pacheco, George;
Sinding, Mikkel-Holger S.;
Kamilari, Maria;
Gilbert, Marcus Thomas Pius;
Schiedrup, Mikkel H.;
Zhang, Guojie.
(2021)
The germline mutational process in rhesus macaque and its implications for phylogenetic dating.
GigaScience.
vol. 10 (5).
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Bogaard, Amy;
Allaby, Robin G.;
Arbuckle, Benjamin;
Bendrey, Robin;
Crowley, Sarah;
Cucchi, Thomas;
Denham, Tim;
Frantz, Laurent;
Fuller, Dorian;
Gilbert, Marcus Thomas Pius;
Karlsson, Elinor K.;
Manin, Aurélie;
Marshall, Fiona;
Mueller, Natalie;
Peters, Joris;
Stépanoff, Charles;
Weide, Alexander;
Larson, Greger.
(2021)
Reconsidering domestication from a process archaeology perspective.
World archaeology.
vol. 53 (1).
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Cavill, Emily L.;
Gopalakrishnan, Shyam;
Puetz, Lara C.;
Ribeiro, Ângela M.;
Mak, Sarah S. T.;
da Fonseca, Rute R.;
Pacheco, George;
Dunlop, Bronwyn;
Accouche, Wilna;
Shah, Nirmal;
Zora, Anna;
Calabrese, Licia;
Genner, Martin;
Jones, Gareth;
Guo, Chunxue;
Zhang, Guojie;
Gilbert, Marcus Thomas Pius.
(2021)
Conservation genomics of the endangered Seychelles Magpie-Robin (Copsychus sechellarum): a unique insight into the history of a precious endemic bird.
IBIS.
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Cavill, Emily;
Liu, Shanlin;
Zhou, Xin;
Gilbert, Marcus Thomas Pius.
(2021)
To bee, or not to bee? One leg is the question.
Molecular Ecology Resources.
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Ciucani, Marta M.;
Jensen, Julie Kragmose;
Sinding, Mikkel-Holger S.;
Smith, Oliver;
Lucenti, Saverio Bartolini;
Rosengren, Erika;
Rook, Lorenzo;
Tuveri, Caterinella;
Arca, Marisa;
Cappellini, Enrico;
Galaverni, Marco;
Randi, Ettore;
Guo, Chunxue;
Zhang, Guojie;
Sicheritz-Pontén, Thomas;
Dalén, Love;
Gilbert, Marcus Thomas Pius;
Gopalakrishnan, Shyam.
(2021)
Evolutionary history of the extinct Sardinian dhole.
Current Biology.
vol. 31 (24).
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Feuerborn, Tatiana R.;
Carmagnini, Alberto;
Losey, Robert J.;
Nomokonova, Tatiana;
Askeyev, Arthur;
Askeyev, Igor;
Askeyev, Oleg;
Antipina, Ekaterina E.;
Appelt, Martin;
Bachura, Olga P.;
Beglane, Fiona;
Bradley, Daniel G.;
Daly, Kevin G.;
Gopalakrishnan, Shyam;
Gregersen, Kristian Murphy;
Guo, Chunxue;
Gusev, Andrei V.;
Jones, Carleton;
Kosintsev, Pavel A.;
Kuzmin, Yaroslav V.;
Mattiangeli, Valeria;
Perri, Angela R.;
Plekhanov, Andrei;
Ramos-Madrigal, Jazmín;
Schmidt, Anne Lisbeth;
Shaymuratova, Dilyara;
Smith, Oliver;
Yavorskaya, Lilia V.;
Zhang, Guojie;
Willerslev, Eske;
Meldgaard, Morten;
Gilbert, Marcus Thomas Pius;
Larson, Greger;
Dalén, Love;
Hansen, Anders J.;
Sinding, Mikkel-Holger S.;
Frantz, Laurent.
(2021)
Modern Siberian dog ancestry was shaped by several thousand years of Eurasian-wide trade and human dispersal.
Proceedings of the National Academy of Sciences of the United States of America.
vol. 118 (39).
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Fontsere, Claudia;
Frandsen, Peter;
Hernandez-Rodriguez, Jessica;
Niemann, Jonas;
Scharff-Olsen, Camilla Hjorth;
Vallet, Dominique;
Le Gouar, Pascaline;
Ménard, Nelly;
Navarro, Arcadi;
Siegismund, Hans Redlef;
Hvilsom, Christina;
Gilbert, Marcus Thomas Pius;
Kuhlwilm, Martin;
Hughes, David;
Marques-Bonet, Tomas.
(2021)
The genetic impact of an Ebola outbreak on a wild gorilla population.
BMC Genomics.
vol. 22.
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Foote, Andrew;
Gilbert, Marcus Thomas Pius;
Gopalakrishnan, Shyam;
Louis, Marie;
Martin, Michael David;
Morin, Phillip A.;
Nykänen, Milaja;
Scharff-Olsen, Camilla;
Excoffier, Laurent.
(2021)
Evidence of long-term purging of mutation load in killer whale genomes.
bioRxiv - the preprint server for biology.
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Foote, Andrew;
Hooper, Rebecca;
Alexander, Alana;
Baird, Robin;
Baker, Charles Scott;
Ballance, Lisa;
Barlow, Jay;
Brownlow, Andrew;
Collins, Tim;
Constantine, Rochelle;
Rosa, Luciano Dalla;
Davison, Nicholas J.;
Durban, John;
Esteban, Ruth;
Excoffier, Laurent;
Martin, Sarah;
Forney, Karin A.;
Gerrodette, Tim;
Gilbert, Marcus Thomas Pius;
Guinet, Christophe;
Hanson, M. Bradley;
Li, Songhai;
Martin, Michael David;
Robertson, Kelly M.;
Samarra, Filipa I.P.;
de Stephanis, Renaud;
Tavares, Sara B.;
Tixier, Paul;
Totterdell, John A.;
Wade, Paul;
Wolf, Jochen B.W.;
Fan, Guangyi;
Zhang, Yaolei;
Morin, Phillip A..
(2021)
Runs of homozygosity in killer whale genomes provide a global record of demographic histories.
Molecular Ecology.
vol. 30 (23).
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Fromm, Bastian;
Tarbier, Marcel;
Smith, Oliver;
Mármol-Sánchez, Emilio;
Dalén, Love;
Gilbert, Marcus Thomas Pius;
Friedländer, Marc R..
(2021)
Ancient microRNA profiles of 14,300-yr-old canid samples confirm taxonomic origin and provide glimpses into tissue-specific gene regulation from the Pleistocene.
RNA: A publication of the RNA Society.
vol. 27.
