Konika Chawla
About
Works at Biocore (Bioinformatics core facility) and part of Bioinformatics and Gene Regulation group. I assists with analysis of different types high throughput data. Such as: Small-RNA sequencing, RNAseq, Microarray data, Bacterial whole genome sequencing data etc.
Publications
2021
-
Tingö, Lina;
Ahlberg, Emelie;
Johansson, Lovisa;
Pedersen, Sindre Andre;
Chawla, Konika;
Sætrom, Pål.
(2021)
Non-coding RNAs in human breast milk: A systematic review.
Frontiers in Immunology
Academic literature review
-
Hegre, Siv Anita;
Samdal, Helle;
Klima, Antonin;
Stovner, Endre Bakken;
Nørsett, Kristin Gabestad;
Liabakk, Nina-Beate.
(2021)
Joint changes in RNA, RNA polymerase II, and promoter activity through the cell cycle identify non-coding RNAs involved in proliferation.
Scientific Reports
Academic article
-
Solvin, Åshild Øksnevad;
Chawla, Konika;
Olsen, Lene Christin;
Hegre, Siv Anita;
Danielsen, Kjersti;
Jenssen, Marita.
(2021)
MicroRNA profiling of psoriatic skin identifies 11 miRNAs associated with disease severity.
Experimental Dermatology
Academic article
2019
-
Mjelle, Robin;
Dima, Simona O;
Bacalbasa, Nicolae;
Chawla, Konika;
Sorop, Andrei;
Cucu, Dana.
(2019)
Comprehensive transcriptomic analyses of tissue, serum, and serum exosomes from hepatocellular carcinoma patients.
BMC Cancer
Academic article
-
Solvin, Åshild Øksnevad;
Chawla, Konika;
Olsen, Lene Christin;
Danielsen, Kjersti;
Jenssen, Marita;
Furberg, Anne-Sofie.
(2019)
Combined mRNA and miRNA Analysis of Psoriatic Skin.
Forum for Nordic Dermato-Venereology
Abstract
2018
-
Toraskar, Jimita Prashant;
Magnussen, Synnøve;
Chawla, Konika;
Svineng, Gunbjørg;
Steigedal, Tonje S..
(2018)
Nephronectin mediates p38 MAPK‐induced cell viability via its integrin binding enhancer motif.
FEBS Open Bio
Academic article
2017
-
Chawla, Konika;
Kuiper, Martin.
(2017)
Discovering, analysing and taking care of knowledge.
Norwegian University of Science and Technology
Doctoral dissertation
2016
-
Chawla, Konika;
Kuiper, Martin.
(2016)
Genes2GO: A web application for querying gene sets for specific GO terms.
Bioinformation
Academic article
-
Tripathi, Sushil;
Vercruysse, Steven;
Chawla, Konika;
Christie, Karen R.;
Blake, Judith A;
Huntley, Rachael P..
(2016)
Gene regulation knowledge commons: community action takes care of DNA binding transcription factors.
Database: The Journal of Biological Databases and Curation
Academic article
2015
-
Tripathi, Sushil;
Flobak, Åsmund;
Chawla, Konika;
Baudot, Anaïs;
Bruland, Torunn;
Thommesen, Liv.
(2015)
The gastrin and cholecystokinin receptors mediated signaling network: a scaffold for data analysis and new hypotheses on regulatory mechanisms.
BMC Systems Biology
Academic article
2013
-
Chawla, Konika;
Tripathi, Sushil;
Thommesen, Liv;
Lægreid, Astrid;
Kuiper, Martin.
(2013)
TFcheckpoint: a curated compendium of specific DNA-binding RNA polymerase II transcription factors.
Bioinformatics
Academic article
2011
-
Chawla, Konika;
Barah, Pankaj;
Kuiper, Martin;
Bones, Atle M..
(2011)
Systems Biology: a Promising Tool to Study Abiotic Stress Responses.
Bentham eBooks
Academic chapter/article/Conference paper
Journal publications
-
Tingö, Lina;
Ahlberg, Emelie;
Johansson, Lovisa;
Pedersen, Sindre Andre;
Chawla, Konika;
Sætrom, Pål.
(2021)
Non-coding RNAs in human breast milk: A systematic review.
Frontiers in Immunology
Academic literature review
-
Hegre, Siv Anita;
Samdal, Helle;
Klima, Antonin;
Stovner, Endre Bakken;
Nørsett, Kristin Gabestad;
Liabakk, Nina-Beate.
(2021)
Joint changes in RNA, RNA polymerase II, and promoter activity through the cell cycle identify non-coding RNAs involved in proliferation.
Scientific Reports
Academic article
-
Solvin, Åshild Øksnevad;
Chawla, Konika;
Olsen, Lene Christin;
Hegre, Siv Anita;
Danielsen, Kjersti;
Jenssen, Marita.
(2021)
MicroRNA profiling of psoriatic skin identifies 11 miRNAs associated with disease severity.
Experimental Dermatology
Academic article
-
Mjelle, Robin;
Dima, Simona O;
Bacalbasa, Nicolae;
Chawla, Konika;
Sorop, Andrei;
Cucu, Dana.
(2019)
Comprehensive transcriptomic analyses of tissue, serum, and serum exosomes from hepatocellular carcinoma patients.
BMC Cancer
Academic article
-
Solvin, Åshild Øksnevad;
Chawla, Konika;
Olsen, Lene Christin;
Danielsen, Kjersti;
Jenssen, Marita;
Furberg, Anne-Sofie.
(2019)
Combined mRNA and miRNA Analysis of Psoriatic Skin.
Forum for Nordic Dermato-Venereology
Abstract
-
Toraskar, Jimita Prashant;
Magnussen, Synnøve;
Chawla, Konika;
Svineng, Gunbjørg;
Steigedal, Tonje S..
(2018)
Nephronectin mediates p38 MAPK‐induced cell viability via its integrin binding enhancer motif.
FEBS Open Bio
Academic article
-
Chawla, Konika;
Kuiper, Martin.
(2016)
Genes2GO: A web application for querying gene sets for specific GO terms.
Bioinformation
Academic article
-
Tripathi, Sushil;
Vercruysse, Steven;
Chawla, Konika;
Christie, Karen R.;
Blake, Judith A;
Huntley, Rachael P..
(2016)
Gene regulation knowledge commons: community action takes care of DNA binding transcription factors.
Database: The Journal of Biological Databases and Curation
Academic article
-
Tripathi, Sushil;
Flobak, Åsmund;
Chawla, Konika;
Baudot, Anaïs;
Bruland, Torunn;
Thommesen, Liv.
(2015)
The gastrin and cholecystokinin receptors mediated signaling network: a scaffold for data analysis and new hypotheses on regulatory mechanisms.
BMC Systems Biology
Academic article
-
Chawla, Konika;
Tripathi, Sushil;
Thommesen, Liv;
Lægreid, Astrid;
Kuiper, Martin.
(2013)
TFcheckpoint: a curated compendium of specific DNA-binding RNA polymerase II transcription factors.
Bioinformatics
Academic article
Part of book/report
-
Chawla, Konika;
Barah, Pankaj;
Kuiper, Martin;
Bones, Atle M..
(2011)
Systems Biology: a Promising Tool to Study Abiotic Stress Responses.
Bentham eBooks
Academic chapter/article/Conference paper
Report
-
Chawla, Konika;
Kuiper, Martin.
(2017)
Discovering, analysing and taking care of knowledge.
Norwegian University of Science and Technology
Doctoral dissertation
Media
2017
-
PosterWohlwend, Martin Rainer; Chawla, Konika; Wisløff, Ulrik; Moreira, Jose Bianco Nascimento. (2017) Exercise regulates expression of long noncoding RNAs. 15th Annual CHFR Symposium on Heart Failure 2017-09-20 - 2017-09-22
2016
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PosterJohansen, Jostein; Chawla, Konika; Olsen, Lene Christin; Sætrom, Pål. (2016) Bioinformatics Core Facility. NTNU Seminar for staff at the future Faculty of Medicine and Health Sciences , Trondheim 2016-11-10 - 2016-11-11
2014
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LectureDe Mulder, Wim; Zavareh, Zahra; Chawla, Konika; Kuiper, Martin. (2014) Experimental Verification of the Quality of Clusterings Produced by Hard Clustering Algorithms After the Removal of Unstable Data Elements. International Academy, Research and Industry Association BIOTECHNO 2014, DBKDA 2014 , Chamonix 2014-04-20 - 2014-04-24
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PosterSanabria, Adriana Maria; Chawla, Konika; Drabløs, Finn; Steigedal, Magnus; Mæland, Johan A.; Afset, Jan Egil. (2014) An attempt to elucidate the genes encoding R3,Z1 and Z2 surface exposed proteins from two streptococcus agalactiae strains from Zimbabwe. SADEBAC, aam(asociacion argentina de microbiologia) 2014 XIX Lancefield International Symposium on Streptococci and Streptococcal Diseases , Buenos Aires 2014-11-09 - 2014-11-12
2011
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PosterTripathi, Sushil; Venkatesan, Aravind; Egaña, Mikel; Zavareh, Zahra; Chawla, Konika; Mironov, Vladimir. (2011) Automated Assessment of High Throughput Hypotheses on Gene Regulatory Mechanisms Involved in the Gastrin Response. ISMB 2011 Bio-Ontologies 2011 , Vienna 2011-07-15 - 2011-07-16