Konika Chawla

Senior Engineer

Department of Clinical and Molecular Medicine Faculty of Medicine and Health Sciences

chawla@ntnu.no +47 45063503 +47 72821344

Laboratoriesenteret, 5th Floor, east/øst wing, Øya, Erling Skjalgssons gate 1

Works at Biocore (Bioinformatics core facility) and part of Bioinformatics and Gene Regulation group. I assists with analysis of different types high throughput data. Such as: Small-RNA sequencing, RNAseq, Microarray data, Bacterial whole genome sequencing data etc.

Scientific, academic and artistic work

Displaying a selection of activities. See all publications in the database

2019

Løset, Mari; Solvin, Åshild Øksnevad; Chawla, Konika; Olsen, Lene Christin; Danielsen, Kjersti; Jenssen, Marita; Furberg, Anne-Sofie; Saunes, Marit; Hveem, Kristian; Sætrom, Pål. (2019) Differentially Expressed miRNAs and mRNAs in Psoriatic Skin. American Society for Human Genetics Annual Meeting . American Society for Human Genetics; Houston, TX. 2019-10-15 - 2019-10-19.
Mjelle, Robin; Dima, Simona O; Bacalbasa, Nicolae; Chawla, Konika; Sorop, Andrei; Cucu, Dana; Herlea, Vlad; Sætrom, Pål; Popescu, Irinel. (2019) Comprehensive transcriptomic analyses of tissue, serum, and serum exosomes from hepatocellular carcinoma patients. BMC Cancer. vol. 19 (1).
Solvin, Åshild Øksnevad; Chawla, Konika; Olsen, Lene Christin; Danielsen, Kjersti; Jenssen, Marita; Furberg, Anne-Sofie; Saunes, Marit; Hveem, Kristian; Sætrom, Pål; Løset, Mari. (2019) Combined mRNA and miRNA Analysis of Psoriatic Skin. Forum for Nordic Dermato-Venereology. vol. 24 (2).

2018

Toraskar, Jimita Prashant; Magnussen, Synnøve; Chawla, Konika; Svineng, Gunbjørg; Steigedal, Tonje S.. (2018) Nephronectin mediates p38 MAPK‐induced cell viability via its integrin binding enhancer motif. FEBS Open Bio. vol. 8 (12).

2017

Chawla, Konika; Kuiper, Martin. (2017) Discovering, analysing and taking care of knowledge. 2017. ISBN 978-82-326-2316-7.
Wohlwend, Martin Rainer; Chawla, Konika; Wisløff, Ulrik; Moreira, Jose Bianco Nascimento. (2017) Exercise regulates expression of long noncoding RNAs. 15th Annual CHFR Symposium on Heart Failure ; 2017-09-20 - 2017-09-22.

2016

Chawla, Konika; Kuiper, Martin. (2016) Genes2GO: A web application for querying gene sets for specific GO terms. Bioinformation. vol. 12 (3).
Johansen, Jostein; Chawla, Konika; Olsen, Lene Christin; Sætrom, Pål. (2016) Bioinformatics Core Facility. Seminar for staff at the future Faculty of Medicine and Health Sciences . NTNU; Trondheim. 2016-11-10 - 2016-11-11.
Tripathi, Sushil; Vercruysse, Steven; Chawla, Konika; Christie, Karen R.; Blake, Judith A; Huntley, Rachael P.; Orchard, Sandra; Hermjakob, Henning; Thommesen, Liv; Lægreid, Astrid; Kuiper, Martin. (2016) Gene regulation knowledge commons: community action takes care of DNA binding transcription factors. Database: The Journal of Biological Databases and Curation.

2015

Tripathi, Sushil; Flobak, Åsmund; Chawla, Konika; Baudot, Anaïs; Bruland, Torunn; Thommesen, Liv; Kuiper, Martin Tremen R.; Lægreid, Astrid. (2015) The gastrin and cholecystokinin receptors mediated signaling network: a scaffold for data analysis and new hypotheses on regulatory mechanisms. BMC Systems Biology. vol. 9 (40).

2014

De Mulder, Wim; Zavareh, Zahra; Chawla, Konika; Kuiper, Martin. (2014) Experimental Verification of the Quality of Clusterings Produced by Hard Clustering Algorithms After the Removal of Unstable Data Elements. BIOTECHNO 2014, DBKDA 2014 . International Academy, Research and Industry Association; Chamonix. 2014-04-20 - 2014-04-24.
Sanabria, Adriana Maria; Chawla, Konika; Drabløs, Finn; Steigedal, Magnus; Mæland, Johan A.; Afset, Jan Egil. (2014) An attempt to elucidate the genes encoding R3,Z1 and Z2 surface exposed proteins from two streptococcus agalactiae strains from Zimbabwe. 2014 XIX Lancefield International Symposium on Streptococci and Streptococcal Diseases . SADEBAC, aam(asociacion argentina de microbiologia); Buenos Aires. 2014-11-09 - 2014-11-12.

2013

Chawla, Konika; Tripathi, Sushil; Thommesen, Liv; Lægreid, Astrid; Kuiper, Martin. (2013) TFcheckpoint: a curated compendium of specific DNA-binding RNA polymerase II transcription factors. Bioinformatics. vol. 29 (19).

2011

Chawla, Konika; Barah, Pankaj; Kuiper, Martin; Bones, Atle M.. (2011) Systems Biology: a Promising Tool to Study Abiotic Stress Responses. Omics and Plant Abiotic Stress Tolerance.
Tripathi, Sushil; Venkatesan, Aravind; Egaña, Mikel; Zavareh, Zahra; Chawla, Konika; Mironov, Vladimir; Thommesen, Liv; Bruland, Torunn; Kuiper, Martin; Lægreid, Astrid. (2011) Automated Assessment of High Throughput Hypotheses on Gene Regulatory Mechanisms Involved in the Gastrin Response. Bio-Ontologies 2011 . ISMB 2011; Vienna. 2011-07-15 - 2011-07-16.