Konika Chawla
About
Works at Biocore (Bioinformatics core facility) where she assists with analysis of different types high throughput data such as: Small-RNA sequencing, RNAseq, Microarray data, Bacterial whole genome sequencing data etc.
Competencies
Publications
2021
-
Solvin, Åshild Øksnevad;
Chawla, Konika;
Olsen, Lene Christin;
Hegre, Siv Anita;
Danielsen, Kjersti;
Jenssen, Marita;
Furberg, Anne-Sofie;
Saunes, Marit;
Hveem, Kristian;
Sætrom, Pål.
(2021)
MicroRNA profiling of psoriatic skin identifies 11 miRNAs associated with disease severity.
Experimental Dermatology
Academic article
-
Tingö, Lina;
Ahlberg, Emelie;
Johansson, Lovisa;
Pedersen, Sindre Andre;
Chawla, Konika;
Sætrom, Pål;
Cione, Erika;
Simpson, Melanie Rae.
(2021)
Non-coding RNAs in human breast milk: A systematic review.
Frontiers in Immunology
Academic literature review
-
Hegre, Siv Anita;
Samdal, Helle;
Klima, Antonin;
Stovner, Endre Bakken;
Nørsett, Kristin Gabestad;
Liabakk, Nina-Beate;
Olsen, Lene Christin;
Chawla, Konika;
Aas, Per Arne;
Sætrom, Pål.
(2021)
Joint changes in RNA, RNA polymerase II, and promoter activity through the cell cycle identify non-coding RNAs involved in proliferation.
Scientific Reports
Academic article
2019
-
Solvin, Åshild Øksnevad;
Chawla, Konika;
Olsen, Lene Christin;
Danielsen, Kjersti;
Jenssen, Marita;
Furberg, Anne-Sofie;
Saunes, Marit;
Hveem, Kristian;
Sætrom, Pål;
Løset, Mari.
(2019)
Combined mRNA and miRNA Analysis of Psoriatic Skin.
Forum for Nordic Dermato-Venereology
Conference abstract
-
Mjelle, Robin;
Dima, Simona O;
Bacalbasa, Nicolae;
Chawla, Konika;
Sorop, Andrei;
Cucu, Dana;
Herlea, Vlad;
Sætrom, Pål;
Popescu, Irinel.
(2019)
Comprehensive transcriptomic analyses of tissue, serum, and serum exosomes from hepatocellular carcinoma patients.
BMC Cancer
Academic article
2018
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Toraskar, Jimita Prashant;
Magnussen, Synnøve;
Chawla, Konika;
Svineng, Gunbjørg;
Steigedal, Tonje S..
(2018)
Nephronectin mediates p38 MAPK‐induced cell viability via its integrin binding enhancer motif.
FEBS Open Bio
Academic article
2017
-
Chawla, Konika;
Kuiper, Martin.
(2017)
Discovering, analysing and taking care of knowledge.
Norges teknisk-naturvitenskapelige universitet
Doctoral thesis
2016
-
Chawla, Konika;
Kuiper, Martin.
(2016)
Genes2GO: A web application for querying gene sets for specific GO terms.
Bioinformation
Academic article
-
Tripathi, Sushil;
Vercruysse, Steven;
Chawla, Konika;
Christie, Karen R.;
Blake, Judith A;
Huntley, Rachael P.;
Orchard, Sandra;
Hermjakob, Henning;
Thommesen, Liv;
Lægreid, Astrid.
(2016)
Gene regulation knowledge commons: community action takes care of DNA binding transcription factors.
Database: The Journal of Biological Databases and Curation
Academic article
2015
-
Tripathi, Sushil;
Flobak, Åsmund;
Chawla, Konika;
Baudot, Anaïs;
Bruland, Torunn;
Thommesen, Liv;
Kuiper, Martin Tremen R.;
Lægreid, Astrid.
(2015)
The gastrin and cholecystokinin receptors mediated signaling network: a scaffold for data analysis and new hypotheses on regulatory mechanisms.
BMC Systems Biology
Academic article
2013
-
Chawla, Konika;
Tripathi, Sushil;
Thommesen, Liv;
Lægreid, Astrid;
Kuiper, Martin.
(2013)
TFcheckpoint: a curated compendium of specific DNA-binding RNA polymerase II transcription factors.
Bioinformatics
Academic article
2011
-
Chawla, Konika;
Barah, Pankaj;
Kuiper, Martin;
Bones, Atle M..
(2011)
Systems Biology: a Promising Tool to Study Abiotic Stress Responses.
Academic chapter
Journal publications
-
Toraskar, Jimita Prashant;
Magnussen, Synnøve;
Chawla, Konika;
Svineng, Gunbjørg;
Steigedal, Tonje S..
(2018)
Nephronectin mediates p38 MAPK‐induced cell viability via its integrin binding enhancer motif.
FEBS Open Bio
Academic article
-
Solvin, Åshild Øksnevad;
Chawla, Konika;
Olsen, Lene Christin;
Danielsen, Kjersti;
Jenssen, Marita;
Furberg, Anne-Sofie;
Saunes, Marit;
Hveem, Kristian;
Sætrom, Pål;
Løset, Mari.
(2019)
Combined mRNA and miRNA Analysis of Psoriatic Skin.
Forum for Nordic Dermato-Venereology
Conference abstract
-
Chawla, Konika;
Kuiper, Martin.
(2016)
Genes2GO: A web application for querying gene sets for specific GO terms.
Bioinformation
Academic article
-
Solvin, Åshild Øksnevad;
Chawla, Konika;
Olsen, Lene Christin;
Hegre, Siv Anita;
Danielsen, Kjersti;
Jenssen, Marita;
Furberg, Anne-Sofie;
Saunes, Marit;
Hveem, Kristian;
Sætrom, Pål.
(2021)
MicroRNA profiling of psoriatic skin identifies 11 miRNAs associated with disease severity.
Experimental Dermatology
Academic article
-
Chawla, Konika;
Tripathi, Sushil;
Thommesen, Liv;
Lægreid, Astrid;
Kuiper, Martin.
(2013)
TFcheckpoint: a curated compendium of specific DNA-binding RNA polymerase II transcription factors.
Bioinformatics
Academic article
-
Tripathi, Sushil;
Flobak, Åsmund;
Chawla, Konika;
Baudot, Anaïs;
Bruland, Torunn;
Thommesen, Liv;
Kuiper, Martin Tremen R.;
Lægreid, Astrid.
(2015)
The gastrin and cholecystokinin receptors mediated signaling network: a scaffold for data analysis and new hypotheses on regulatory mechanisms.
BMC Systems Biology
Academic article
-
Tingö, Lina;
Ahlberg, Emelie;
Johansson, Lovisa;
Pedersen, Sindre Andre;
Chawla, Konika;
Sætrom, Pål;
Cione, Erika;
Simpson, Melanie Rae.
(2021)
Non-coding RNAs in human breast milk: A systematic review.
Frontiers in Immunology
Academic literature review
-
Mjelle, Robin;
Dima, Simona O;
Bacalbasa, Nicolae;
Chawla, Konika;
Sorop, Andrei;
Cucu, Dana;
Herlea, Vlad;
Sætrom, Pål;
Popescu, Irinel.
(2019)
Comprehensive transcriptomic analyses of tissue, serum, and serum exosomes from hepatocellular carcinoma patients.
BMC Cancer
Academic article
-
Tripathi, Sushil;
Vercruysse, Steven;
Chawla, Konika;
Christie, Karen R.;
Blake, Judith A;
Huntley, Rachael P.;
Orchard, Sandra;
Hermjakob, Henning;
Thommesen, Liv;
Lægreid, Astrid.
(2016)
Gene regulation knowledge commons: community action takes care of DNA binding transcription factors.
Database: The Journal of Biological Databases and Curation
Academic article
-
Hegre, Siv Anita;
Samdal, Helle;
Klima, Antonin;
Stovner, Endre Bakken;
Nørsett, Kristin Gabestad;
Liabakk, Nina-Beate;
Olsen, Lene Christin;
Chawla, Konika;
Aas, Per Arne;
Sætrom, Pål.
(2021)
Joint changes in RNA, RNA polymerase II, and promoter activity through the cell cycle identify non-coding RNAs involved in proliferation.
Scientific Reports
Academic article
Part of book/report
-
Chawla, Konika;
Barah, Pankaj;
Kuiper, Martin;
Bones, Atle M..
(2011)
Systems Biology: a Promising Tool to Study Abiotic Stress Responses.
Academic chapter
Student thesis or dissertation
-
Chawla, Konika;
Kuiper, Martin.
(2017)
Discovering, analysing and taking care of knowledge.
Norges teknisk-naturvitenskapelige universitet
Doctoral thesis
Outreach
2017
-
Conference posterWohlwend, Martin Rainer; Chawla, Konika; Wisløff, Ulrik; Bianco Nascimento Moreira, Jose. (2017) Exercise regulates expression of long noncoding RNAs. 15th Annual CHFR Symposium on Heart Failure
2016
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Conference posterJohansen, Jostein; Chawla, Konika; Olsen, Lene Christin; Sætrom, Pål. (2016) Bioinformatics Core Facility. Seminar for staff at the future Faculty of Medicine and Health Sciences
2014
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Conference posterSanabria, Adriana Maria; Chawla, Konika; Drabløs, Finn; Steigedal, Magnus; Mæland, Johan A.; Afset, Jan Egil. (2014) An attempt to elucidate the genes encoding R3,Z1 and Z2 surface exposed proteins from two streptococcus agalactiae strains from Zimbabwe. 2014 XIX Lancefield International Symposium on Streptococci and Streptococcal Diseases
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LectureMulder, Wim De; Zavareh, Zahra; Chawla, Konika; Kuiper, Martin. (2014) Experimental Verification of the Quality of Clusterings Produced by Hard Clustering Algorithms After the Removal of Unstable Data Elements. BIOTECHNO 2014, DBKDA 2014
2011
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Conference posterTripathi, Sushil; Venkatesan, Aravind; Egaña, Mikel; Zavareh, Zahra; Chawla, Konika; Mironov, Vladimir; Thommesen, Liv; Bruland, Torunn; Kuiper, Martin; Lægreid, Astrid. (2011) Automated Assessment of High Throughput Hypotheses on Gene Regulatory Mechanisms Involved in the Gastrin Response. Bio-Ontologies 2011