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Michael D. Martin

Michael D. Martin

Professor
Department of Natural History
NTNU University Museum

mike.martin@ntnu.no
+4790151850 Schøninghuset, B329, Kalvskinnet, Erling Skakkes gate 47A
Google Scholar Holomuseomics @ INH BiGTREE
About Research Publications Media

About

Research in my lab involves analyzing genome sequences in order to reconstruct and interpret the evolutionary histories of plants, animals, and their associated microbial communities. I am particularly attracted to cases in which ancient/degraded DNA derived from natural history collections allows us to understand present-day distributions of biodiversity by looking directly into the past.

Research opportunities for master students are available in the Holomuseomics research group. I encourage you to make contact if you are interested in becoming involved.

Competencies

  • Ancient DNA
  • Bioinformatics
  • Genetics and genomics
  • Phylogenomics
  • Phylogeography
  • Population genetics
  • Population genomics

Research

  • Holomuseomics research group

ColdRein

Palaeo-genomics to reconstruct the evolutionary responses of endemic high-arctic reindeer to past environmental change

DarwinPlants

Probing the genomic basis of rapid evolutionary diversification in the Galápagos daisy trees (genus Scalesia)

BiGTREE

BiGTREE is an HKdir-funded NORPART training network between Norway, Peru and Colombia. This network aims to provide training in cutting-edge bioinformatic evolutionary analysis in the field of biodiversity genomics.

Publications

  • Chronological
  • By category
  • See all publications in Cristin

2023

  • Battlay, Paul; Wilson, Jonathan; Bieker, Vanessa Carina; Lee, Christopher; Prapas, Diana; Petersen, Bent; Craig, Sam; van Boheemen, Lotte; Scalone, Romain; de Silva, Nissanka; Sharma, Amit; Konstantinovic, Bojan; Nurkowski, Kristin; Rieseberg, Loren H.; Connallon, Tim; Martin, Michael David; Hodgins, Kathryn A.. (2023) Large haploblocks underlie rapid adaptation in the invasive weed Ambrosia artemisiifolia. Nature Communications. volum 14 (1).
    Academic article
  • Brandslet, Steinar; Martin, Michael David; Bieker, Vanessa Carina. (2023) Supergenes helped bring alien plant to Norway. Gemini (English edition).
    Popular scientific article
  • Cerca Monteiro De Oliveira, José Pedro; Cotoras, Darko; Bieker, Vanessa Carina; De-Kayne, Rishi; Vargas, Pablo; Fernández-Mazuecos, Mario; López-Delgado, Julia; White, Oliver; Stervander, Martin; Geneva, Anthony J.; Andino, Juan E. Guevara; Meier, Joana Isabel; Roeble, Lizzie; Brée, Baptiste; Patiño, Jairo; Guayasamin, Juan M.; de Lourdes Torres, María; Valdebenito, Hugo; Castañeda, María del Rosario. (2023) Evolutionary genomics of oceanic island radiations. Trends in Ecology & Evolution.
    Academic literature review
  • Hansen, Charles Christian Riis; Láruson, Áki Jarl; Rasmussen, Jacob Agerbo; Chimal Ballesteros, Jesus Adrian; Sinding, Mikkel Holger Strander; Hallgrimsson, Gunnar T.; von Schmalensee, Menja; Stefansson, Robert A.; Skarphédinsson, Kristinn Haukur; Labansen, Aili Lage; Leivits, Madis; Sonne, Christian; Dietz, Rune; Skelmose, Kim; Boertmann, David; Eulaers, Igor; Martin, Michael David; Helgason, Agnar S.; Gilbert, Marcus Thomas Pius. (2023) Genomic diversity and differentiation between island and mainland populations of white-tailed eagles (Haliaeetus albicilla). Molecular Ecology. volum 32.
    Academic article
  • Zhang, Pei; Zhu, Yuanzhen; Guo, Qunfei; Li, Ji; Zhan, Xiaoyu; Yu, Hao; Xie, Nianxia; Tan, Huishuang; Lundholm, Nina; Garcia-Cuetos, Lydia; Martin, Michael David; Antó Subirats, Meritxell; Su, Yi-Hsien; Ruiz-Trillo, Iñaki; Martindale, Mark Q.; Yu, Jr-Kai; Gilbert, M. Thomas P.; Zhang, Guojie; Li, Qiye. (2023) On the origin and evolution of RNA editing in metazoans. Cell reports. volum 42 (2).
    Academic article

2022

  • Bieker, Vanessa Carina; Battlay, Paul; Petersen, Bent; Sun, Xin; Wilson, Jonathan; Brealey, Jaelle C.; Bretagnolle, François; Nurkowski, Kristin; Lee, Chris; Sánchez Barreiro, Fatima; Owens, Gregory; Lee, Jacqueline; Kellner, Fabian Laszlo; van Boheeman, Lotte; Gopalakrishnan, Shyam; Gaudeul, Myriam; Mueller-Schaerer, Heinz; Lommen, Suzanne; Karrer, Gerhard. (2022) Uncovering the genomic basis of an extraordinary plant invasion. Science Advances. volum 8 (34).
    Academic article
  • Brandslet, Steinar; Cerca Monteiro De Oliveira, José Pedro; Martin, Michael David. (2022) Darwin’s giant daises and evolution. Gemini (English edition).
    Popular scientific article
  • Brealey, Jaelle; Lecaudey, Laurene Alicia; Kodama, Miyako; Rasmussen, Jacob A.; Sveier, Harald; Dheilly, Nolwenn M.; Martin, Michael David; Limborg, Morten Tønsberg. (2022) Microbiome “Inception”: an Intestinal Cestode Shapes a Hierarchy of Microbial Communities Nested within the Host. mBio. volum 13 (3).
    Academic article
  • Cerca, José; Petersen, Bent; Lazaro-Guevara, José Miguel; Rivera-Colón, Angel G.; Birkeland, Siri; Vizueta, Joel; Li, Siyu; Li, Qionghou; Loureiro, João; Kosawang, Chatchai; Jaramillo Díaz, Patricia; Rivas-Torres, Gonzalo; Fernández-Mazuecos, Mario; Vargas, Pablo; McCauley, Ross; Petersen, Gitte; Santos-Bay, Luisa; Wales, Nathan; Catchen, Julian M.. (2022) The genomic basis of the plant island syndrome in Darwin’s giant daisies. Nature Communications. volum 13.
    Academic article
  • Gopalakrishnan, Shyam; Ebenesersdottir, S.Sunna; Lundstrøm, Inge K.C.; Turner-Walker, Gordon; Moore, Kristjan H.S.; Luisi, Pierre; Magaryan, Ashot; Martin, Michael David; Ellegaard, Martin Rene; Magnusson, Olafur T.; Sigurdsson, Asgeir; Snorradóttir, Steinunn; Magnúsdóttir, Droplaug N.; Laffoon, Jason E.; van Dorp, Lucy; Liu, Xiaodong; Moltke, Ida; Avila-Arcos, María C.; Schraiber, Joshua G.. (2022) The population genomic legacy of the second plague pandemic. Current Biology. volum 32.
    Academic article
  • Hansen, Charles Christian Riis; Baleka, Sina; Magnea Guðjónsdóttir, Sólveig; Agerbo Rasmussen, Jacob; Chimal Ballesteros, Jesus Adrian; Thor Hallgrimsson, Gunnar; Stefansson, Robert A.; Von Schmalensee, Menja; Haukur Skarphedinsson, Kristinn; Lage Labansen, Aili; Leivits, Madis; Skelmose, Kim; Sonne, Christian; Dietz, Rune; Boertmann, David; Eulaers, Igor; Martin, Michael David; Pálsson, Snæbjörn. (2022) Erratum to: Distinctive mitogenomic lineages within populations of White-tailed Eagles(Ornithology DOI: 10.1093/ornithology/ukab081). The AUK: A Quarterly Journal of Ornithology. volum 139 (3).
    Errata
  • Malmstrom, Carolyn; Martin, Michael David; Gagnevin, Lionel. (2022) Exploring the Emergence and Evolution of Plant Pathogenic Microbes Using Historical and Paleontological Sources. Annual Review of Phytopathology. volum 60.
    Academic literature review
  • Nygaard, Malene; Kopatz, Alexander; Speed, James David Mervyn; Martin, Michael David; Prestø, Tommy; Kleven, Oddmund; Bendiksby, Mika. (2022) Spatiotemporal monitoring of the rare northern dragonhead (Dracocephalum ruyschiana, Lamiaceae) — SNP genotyping and environmental niche modeling herbarium specimens. Ecology and Evolution. volum 12 (8).
    Academic article

2021

  • Aguilar Tomasini, Maria Alejandra; Martin, Michael David; Speed, James David Mervyn. (2021) Assessing spatial patterns of phylogenetic diversity of Mexican mammals for biodiversity conservation. Global Ecology and Conservation. volum 31.
    Academic article
  • Foote, Andrew; Gilbert, Marcus Thomas Pius; Gopalakrishnan, Shyam; Louis, Marie; Martin, Michael David; Morin, Phillip A.; Nykänen, Milaja; Scharff-Olsen, Camilla; Excoffier, Laurent. (2021) Evidence of long-term purging of mutation load in killer whale genomes. bioRxiv - the preprint server for biology.
    Academic article
  • Foote, Andrew; Hooper, Rebecca; Alexander, Alana; Baird, Robin; Baker, Charles Scott; Ballance, Lisa; Barlow, Jay; Brownlow, Andrew; Collins, Tim; Constantine, Rochelle; Rosa, Luciano Dalla; Davison, Nicholas J.; Durban, John; Esteban, Ruth; Excoffier, Laurent; Martin, Sarah; Forney, Karin A.; Gerrodette, Tim; Gilbert, Marcus Thomas Pius. (2021) Runs of homozygosity in killer whale genomes provide a global record of demographic histories. Molecular Ecology. volum 30 (23).
    Academic article
  • Hansen, Charles Christian Riis; Baleka, Sina; Gudjonsdottir, Solveig Magnea; Rasmussen, Jacob Agerbo; Chimal Ballesteros, Jesus Adrian; Hallgrimsson, Gunnar Thor; Stefansson, Robert A.; von Schmalensee, Menja; Skarphédinsson, Kristinn Haukur; Labansen, Aili Lage; Leivits, Madis; Skelmose, Kim; Sonne, Christian; Dietz, Rune; Boertmann, David; Eulaers, Igor; Martin, Michael David; Pálsson, Snæbjörn. (2021) Distinctive mitogenomic lineages within populations of white-tailed eagles (Haliaeetus albicilla). Journal of Ornithology. volum 139 (2).
    Academic article
  • Meleshko, Olena; Martin, Michael David; Korneliussen, Thorfinn Sand; Schröck, Christian; Lamkowski, Paul; Schmutz, Jeremy; Healey, Adam; Piatkowski, Bryan T; Shaw, A. Jonathan; Weston, David J; Flatberg, Kjell Ivar; Szövényi, Péter; Hassel, Kristian; Stenøien, Hans K.. (2021) Extensive genome-wide phylogenetic discordance is due to incomplete lineage sorting and not ongoing introgression in a rapidly radiated bryophyte genus. Molecular Biology and Evolution (MBE). volum 38 (7).
    Academic article
  • Rasmussen, Jacob A.; Villumsen, Kasper Rømer; Duchêne, David; Puetz, Lara; Delmont, Tom; Sveier, Harald; von Gersdorff Jørgensen, Louise; Præbel, Kim; Martin, Michael David; Bojesen, Anders Miki; Gilbert, Marcus Thomas Pius; Kristiansen, Karsten; Limborg, Morten T.. (2021) Genome-resolved metagenomics suggests a mutualistic relationship between Mycoplasma and salmonid hosts. Communications Biology. volum 4.
    Academic article
  • Rawlence, Nicolas J.; Knapp, Michael; Martin, Michael David; Wales, Nathan. (2021) Applied Uses of Ancient DNA. Frontiers in Ecology and Evolution. volum 9.
    Academic article
  • Ristaino, Jean B.; Anderson, Pamela; Bebber, Daniel; Brauman, Kate; Cunniffe, Nik; Fedoroff, Nina; Finegold, Cambria; Garrett, Karen A.; Gilligan, Christopher; Jones, Christopher M.; Martin, Michael David; MacDonald, Graham K.; Neenan, Patricia; Records, Angela; Schmale, David G.; Tateosian, Laura; Wei, Qingshan. (2021) The persistent threat of emerging plant disease pandemics to global food security. Proceedings of the National Academy of Sciences of the United States of America. volum 118 (23).
    Academic article
  • Speed, James David Mervyn; Chimal Ballesteros, Jesus Adrian; Martin, Michael David; Barrio, Isabel C.; Vuorinen, Katariina Elsa Maria; Soininen, Eeva Marjatta. (2021) Will borealization of Arctic tundra herbivore communities be driven by climate warming or vegetation change?. Global Change Biology. volum 27 (24).
    Academic article

2020

  • Bakker, Freek T.; Martin, Michael David; Bieker, Vanessa Carina. (2020) Herbarium Collection-Based Plant Evolutionary Genetics and Genomics. Frontiers in Ecology and Evolution. volum 8.
    Editorial
  • Barnett, Ross; Westbury, Michael V; Sandoval-Velasco, Marcela; Vieira, Filipe G.; Jeon, Sungwon; Zazula, Grant; Martin, Michael David; Ho, Simon Y.W.; Mather, Niklas; Gopalakrishnan, Shyam; Ramos-Madrigal, Jazmín; de Manuel, Marc; Zepeda-Mendoza, Marie Lisandra; Antunes, Agostinho; Carmona Baez, Aldo; De Cahsan, Binia; Larson, Greger; O'Brien, Stephen J.; Eizirik, Eduardo. (2020) Genomic adaptations and evolutionary history of the extinct scimitar-toothed cat, Homotherium latidens. Current Biology. volum 30 (24).
    Academic article
  • Bieker, Vanessa Carina; Sánchez Barreiro, Fatima; Rasmussen, Jacob Agerbo; Brunier, Marie; Wales, Nathan; Martin, Michael David. (2020) Metagenomic analysis of historical herbarium specimens reveals a postmortem microbial community. Molecular Ecology Resources. volum 20.
    Academic article
  • de Manuel, Marc; Barnett, Ross; Sandoval-Velasco, Marcela; Yamaguchi, Nobuyuki; Vieira, Filipe G.; Lisandra Zepeda Mendoza, Zepeda; Liu, Shiping; Martin, Michael David; Sinding, Mikkel-Holger S.; Mak, Sarah Siu Tze; Carøe, Christian; Liu, Shanlin; Guo, Chunxue; Zheng, Jiao; Zazula, Grant; Baryshnikov, Gennady; Eizirik, Eduardo; Koepfli, Klaus-Peter; Johnson, Warren E.. (2020) The evolutionary history of extinct and living lions. Proceedings of the National Academy of Sciences of the United States of America. volum 117 (20).
    Academic literature review
  • Dehasque, Marianne; Ávila-Arcos, María C; Díez-del-Molino, David; Fumagalli, Matteo; Guschanski, Katerina; Lorenzen, Eline D.; Malaspinas, Anna-Sapfo; Marques-Bonet, Tomas; Martin, Michael David; Murray, Gemma G.R.; Papadopulos, Alexander; Therkildsen, Nina Overgaard; Wegmann, Daniel; Dalén, Love; Foote, Andrew. (2020) Inference of natural selection from ancient DNA. Evolution Letters. volum 4 (2).
    Academic article
  • Kistler, Logan; Bieker, Vanessa Carina; Martin, Michael David; Pedersen, Mikkel Winther; Madrigal, Jazmín Ramos; Wales, Nathan. (2020) Ancient plant genomics in archaeology, herbaria, and the environment. Annual Review of Plant Biology. volum 71.
    Academic article

2019

  • Foote, Andrew D.; Martin, Michael David; Louis, Marie; Pacheco, George; Robertson, Kelly M.; Sinding, Mikkel-Holger; Amaral, Ana R.; Baird, Robin; Baker, Charles; Ballance, Lisa; Barlow, Jay; Brownlow, Andrew; Collins, Tim; Constantine, Rochelle; Dabin, Willy; Rosa, Luciano Dalla; Davison, Nicholas J.; Durban, John W.; Esteban, Ruth. (2019) Killer whale genomes reveal a complex history of recurrent admixture and vicariance. Molecular Ecology. volum 28 (14).
    Academic article
  • Maurice, Sundy Ursula Mary Jane; Montes, Melanie; Nielsen, Bent J.; Bødker, Lars; Martin, Michael David; Jønck, Carina; Kjøller, Rasmus; Rosendahl, Søren. (2019) Population genomics of an outbreak of the potato late blight pathogen, Phytophthora infestans, reveals both clonality and high genotypic diversity. Molecular plant pathology. volum 20 (8).
    Academic article
  • Mienna, Ida Marielle; Speed, James David Mervyn; Bendiksby, Mika; Thornhill, Andrew H.; Mishler, Brent D.; Martin, Michael David. (2019) Differential patterns of floristic phylogenetic diversity across a post-glacial landscape. Journal of Biogeography. volum 47.
    Academic article
  • Speed, James David Mervyn; Skjelbred, Ina Åsnes; Barrio, Isabel C.; Martin, Michael David; Berteaux, Dominique; Bueno, C. Guillermo; Christie, Katie S.; Forbes, Bruce C.; Forbey, Jennifer; Fortin, Daniel; Grytnes, John-Arvid; Hoset, Katrine Skamfer; Lecomte, Nicolas; Marteinsdóttir, Bryndís; Mosbacher, Jesper Bruun; Pedersen, Åshild Ønvik; Ravolainen, Virve; Rees, Eileen C.; Skarin, Anna. (2019) Trophic interactions and abiotic factors drive functional and phylogenetic structure of vertebrate herbivore communities across the Arctic tundra biome. Ecography. volum 42 (6).
    Academic article
  • Thomas, Jessica E.; Carvalho, Gary R.; Haile, James; Rawlence, Nicolas J.; Martin, Michael David; Ho, Simon Y.W.; Sigfússon, Arnór Þ.; Jósefsson, Vigfús A.; Frederiksen, Morten; Linnebjerg, Jannie F.; Castruita, Jose A. Samaniego; Niemann, Jonas; Sinding, Mikkel-Holger S.; Sandoval-Velasco, Marcela; Soares, André E.R.; Lacy, Robert; Barilaro, Christina; Best, Julia; Brandis, Dirk. (2019) Demographic reconstruction from ancient DNA supports rapid extinction of the great auk. eLIFE. volum 8:e47509.
    Academic article

2018

  • Bieker, Vanessa Carina; Martin, Michael David. (2018) Implications and future prospects for evolutionary analyses of DNA in historical herbarium collections. Botany Letters. volum 165 (3-4).
    Academic article
  • Martin, Michael David; Quiroz-Claros, Elva; Brush, Grace S.; Zimmer, Elizabeth A.. (2018) Herbarium collection-based phylogenetics of the ragweeds (Ambrosia, Asteraceae). Molecular Phylogenetics and Evolution. volum 120.
    Academic article
  • O’Hanlon, Simon J; Rieux, Adrien; Farrer, Rhys A; Rosa, Gonçalo M; Waldman, Bruce; Bataille, Arnaud; Kosch, Tiffany A; Murray, Kris A; Brankovics, Balázs; Fumagalli, Matteo; Martin, Michael David; Wales, Nathan; Alvarado-Rybak, Mario; Bates, Kieran A.; Berger, Lee R.; Böll, Susanne; Brookes, Lola; Clare, Frances; Courtois, Elodie A.. (2018) Recent Asian origin of chytrid fungi causing global amphibian declines. Science. volum 360.
    Academic article

2017

  • Grube, Martin; Gaya, Ester; Kauserud, Håvard; Smith, Adrian M.; Avery, Simon V.; Fernstad, Sara F.; Muggia, Lucia; Martin, Michael David; Eivindsen, Tove; Kõljalg, Urmas; Bendiksby, Mika. (2017) The next generation fungal diversity researcher. Fungal Biology Reviews. volum 31 (3).
    Academic literature review
  • Martin, Michael David; Jay, Flora; Castellano, Sergi; Slatkin, Montgomery. (2017) Determination of genetic relatedness from low-coverage human genome sequences using pedigree simulations. Molecular Ecology. volum 26 (16).
    Academic article
  • Sánchez Barreiro, Fatima; Vieira, Filipe G.; Martin, Michael D.; Haile, James; Gilbert, Marcus Thomas Pius; Wales, Nathan. (2017) Characterizing restriction enzyme-associated loci in historic ragweed (Ambrosia artemisiifolia) voucher specimens using custom-designed RNA probes. Molecular Ecology Resources. volum 17 (2).
    Academic article
  • Thomas, Jessica E; Carvalho, Gary R.; Haile, James; Martin, Michael David; Castruita, Jose A. Samaniego; Niemann, Jonas; Sinding, Mikkel Holger Strander; Sandoval-Velasco, Marcela; Rawlence, Nicolas J.; Fuller, Errol; Fjeldså, Jon; Hofreiter, Michael; Stewart, John R; Gilbert, Marcus Thomas Pius; Knapp, Michael. (2017) An ‛Aukward’ tale: a genetic approach to discover the whereabouts of the last Great Auks. Genes. volum 8 (6).
    Academic article

2016

  • Foote, Andy; Vijay, Nagarjun; Avila-Arcos, Maria; Baird, Robin; Durban, John; Morin, Phillip; Fumagalli, Matteo; Gibbs, Richard; Hanson, Bradley; Korneliussen, Thorfinn; Martin, Michael D.; Robertson, Kelly; Sousa, Vitor; Vieira, Filipe G.; Vinar, Tomas; Wade, Paul; Worley, Kim; Excoffier, Laurent; Gilbert, M Thomas P. (2016) Genome-culture coevolution drives rapid divergence in the killer whale. Nature Communications. volum 7.
    Academic article
  • Martin, Michael D; Olsen, Morten T; Samaniego, Jose; Zimmer, Elizabeth A; Gilbert, Marcus Thomas Pius. (2016) The population genomic basis of geographic differentiation in North American common ragweed (Ambrosia artemisiifolia L.). Ecology and Evolution. volum 6 (11).
    Academic article
  • Martin, Michael D; Vieira, Filipe G; Ho, Simon Y W; Wales, Nathan; Schubert, Mikkel; Seguin-Orlando, Andaine; Ristaino, Jean B; Gilbert, M Thomas P. (2016) Genomic characterization of a South American Phytophthora hybrid mandates reassessment of the geographic origins of Phytophthora infestans. Molecular Biology and Evolution (MBE). volum 33.
    Academic article
  • Saville, Amanda; Martin, Michael David; Ristaino, Jean B.. (2016) Historic late blight outbreaks caused by a widespread dominant lineage of Phytophthora infestans (Mont.) de Bary. PLOS ONE. volum 11:e0168381 (12).
    Academic literature review

2015

  • Der Sarkissian, Clio; Allentoft, M; Campos, Paula F; Cappellini, Enrico; Ermini, Luca; Fernandez, Ruth; Hansen, Anders J; Korneliussen, Thorfinn; Margaryan, Ashot; Martin, Michael D; Moreno-Mayar, J V; Raghavan, Maanasa; Rasmussen, Morten; Velasco, Marcela Sandoval; Schroeder, Hannes; Schubert, Mikkel; Seguin-Orlando, Andaine; Wales, Nathan; Gilbert, M Thomas P. (2015) Ancient genomics. Philosophical Transactions of the Royal Society of London. Biological Sciences. volum 370.
    Academic literature review

2014

  • Martin, Michael D; Ho, Simon Y W; Wales, Nathan; Ristaino, Jean B; Gilbert, M Thomas P. (2014) Persistence of the mitochondrial lineage of the Irish potato famine pathogen in the New World. Molecular Biology and Evolution (MBE). volum 31.
    Academic article
  • Martin, Michael D; Zimmer, Elizabeth A; Olsen, Morten T; Foote, Andrew D; Gilbert, M Thomas P; Brush, Grace S. (2014) Herbarium specimens reveal a phylogeographic shift in common ragweed during native range disturbance. Molecular Ecology. volum 23.
    Academic article
  • Schubert, Mikkel; Ermini, Luca; Der Sarkissian, Clio; Jónsson, Hákon; Ginolhac, Aurélien; Schaefer, Robert; Fernández, Ruth; Martin, Michael D; Kircher, Martin; McCue, Molly E; Willerslev, Eske; Orlando, Ludovic. (2014) Characterizing ancient genomes: from sequence reads to SNP detection, phylogenomics, and metagenomics analyses. Nature Protocols. volum 9.
    Academic article
  • Zhang, Guojie; Martin, Michael D; et al., -. (2014) Comparative genomics reveals insights into avian genome evolution and adaptation. Science. volum 346 (6215).
    Academic article

2013

  • Martin, Michael D; Cappellini, Enrico; Samaniego, Jose; Zepeda, M. Lisandra; Campos, Paula F; Seguin-Orlando, Andaine; Wales, Nathan; Orlando, Ludovic; Ho, Simon Y W; Dietrich, Fred S; Mieczkowski, Piotr A; Heitman, Joseph; Willerslev, Eske; Krogh, Anders; Ristaino, Jean B; Gilbert, M Thomas P. (2013) Reconstructing genome evolution in historic samples of the Irish potato famine pathogen. Nature Communications. volum 4.
    Academic article

2010

  • Martin, Michael D; Chamecki, Marcelo; Brush, Grace. (2010) Anthesis synchronization and floral morphology determine diurnal patterns of ragweed pollen dispersal. Agricultural and Forest Meteorology. volum 150.
    Academic article

2009

  • Martin, Michael D; Chamecki, Marcelo; Brush, Grace; Meneveau, Charles; Parlange, Marc. (2009) Pollen clumping and wind dispersal in an invasive angiosperm. American Journal of Botany. volum 96.
    Academic article

Journal publications

  • Battlay, Paul; Wilson, Jonathan; Bieker, Vanessa Carina; Lee, Christopher; Prapas, Diana; Petersen, Bent; Craig, Sam; van Boheemen, Lotte; Scalone, Romain; de Silva, Nissanka; Sharma, Amit; Konstantinovic, Bojan; Nurkowski, Kristin; Rieseberg, Loren H.; Connallon, Tim; Martin, Michael David; Hodgins, Kathryn A.. (2023) Large haploblocks underlie rapid adaptation in the invasive weed Ambrosia artemisiifolia. Nature Communications. volum 14 (1).
    Academic article
  • Brandslet, Steinar; Martin, Michael David; Bieker, Vanessa Carina. (2023) Supergenes helped bring alien plant to Norway. Gemini (English edition).
    Popular scientific article
  • Cerca Monteiro De Oliveira, José Pedro; Cotoras, Darko; Bieker, Vanessa Carina; De-Kayne, Rishi; Vargas, Pablo; Fernández-Mazuecos, Mario; López-Delgado, Julia; White, Oliver; Stervander, Martin; Geneva, Anthony J.; Andino, Juan E. Guevara; Meier, Joana Isabel; Roeble, Lizzie; Brée, Baptiste; Patiño, Jairo; Guayasamin, Juan M.; de Lourdes Torres, María; Valdebenito, Hugo; Castañeda, María del Rosario. (2023) Evolutionary genomics of oceanic island radiations. Trends in Ecology & Evolution.
    Academic literature review
  • Hansen, Charles Christian Riis; Láruson, Áki Jarl; Rasmussen, Jacob Agerbo; Chimal Ballesteros, Jesus Adrian; Sinding, Mikkel Holger Strander; Hallgrimsson, Gunnar T.; von Schmalensee, Menja; Stefansson, Robert A.; Skarphédinsson, Kristinn Haukur; Labansen, Aili Lage; Leivits, Madis; Sonne, Christian; Dietz, Rune; Skelmose, Kim; Boertmann, David; Eulaers, Igor; Martin, Michael David; Helgason, Agnar S.; Gilbert, Marcus Thomas Pius. (2023) Genomic diversity and differentiation between island and mainland populations of white-tailed eagles (Haliaeetus albicilla). Molecular Ecology. volum 32.
    Academic article
  • Zhang, Pei; Zhu, Yuanzhen; Guo, Qunfei; Li, Ji; Zhan, Xiaoyu; Yu, Hao; Xie, Nianxia; Tan, Huishuang; Lundholm, Nina; Garcia-Cuetos, Lydia; Martin, Michael David; Antó Subirats, Meritxell; Su, Yi-Hsien; Ruiz-Trillo, Iñaki; Martindale, Mark Q.; Yu, Jr-Kai; Gilbert, M. Thomas P.; Zhang, Guojie; Li, Qiye. (2023) On the origin and evolution of RNA editing in metazoans. Cell reports. volum 42 (2).
    Academic article
  • Bieker, Vanessa Carina; Battlay, Paul; Petersen, Bent; Sun, Xin; Wilson, Jonathan; Brealey, Jaelle C.; Bretagnolle, François; Nurkowski, Kristin; Lee, Chris; Sánchez Barreiro, Fatima; Owens, Gregory; Lee, Jacqueline; Kellner, Fabian Laszlo; van Boheeman, Lotte; Gopalakrishnan, Shyam; Gaudeul, Myriam; Mueller-Schaerer, Heinz; Lommen, Suzanne; Karrer, Gerhard. (2022) Uncovering the genomic basis of an extraordinary plant invasion. Science Advances. volum 8 (34).
    Academic article
  • Brandslet, Steinar; Cerca Monteiro De Oliveira, José Pedro; Martin, Michael David. (2022) Darwin’s giant daises and evolution. Gemini (English edition).
    Popular scientific article
  • Brealey, Jaelle; Lecaudey, Laurene Alicia; Kodama, Miyako; Rasmussen, Jacob A.; Sveier, Harald; Dheilly, Nolwenn M.; Martin, Michael David; Limborg, Morten Tønsberg. (2022) Microbiome “Inception”: an Intestinal Cestode Shapes a Hierarchy of Microbial Communities Nested within the Host. mBio. volum 13 (3).
    Academic article
  • Cerca, José; Petersen, Bent; Lazaro-Guevara, José Miguel; Rivera-Colón, Angel G.; Birkeland, Siri; Vizueta, Joel; Li, Siyu; Li, Qionghou; Loureiro, João; Kosawang, Chatchai; Jaramillo Díaz, Patricia; Rivas-Torres, Gonzalo; Fernández-Mazuecos, Mario; Vargas, Pablo; McCauley, Ross; Petersen, Gitte; Santos-Bay, Luisa; Wales, Nathan; Catchen, Julian M.. (2022) The genomic basis of the plant island syndrome in Darwin’s giant daisies. Nature Communications. volum 13.
    Academic article
  • Gopalakrishnan, Shyam; Ebenesersdottir, S.Sunna; Lundstrøm, Inge K.C.; Turner-Walker, Gordon; Moore, Kristjan H.S.; Luisi, Pierre; Magaryan, Ashot; Martin, Michael David; Ellegaard, Martin Rene; Magnusson, Olafur T.; Sigurdsson, Asgeir; Snorradóttir, Steinunn; Magnúsdóttir, Droplaug N.; Laffoon, Jason E.; van Dorp, Lucy; Liu, Xiaodong; Moltke, Ida; Avila-Arcos, María C.; Schraiber, Joshua G.. (2022) The population genomic legacy of the second plague pandemic. Current Biology. volum 32.
    Academic article
  • Hansen, Charles Christian Riis; Baleka, Sina; Magnea Guðjónsdóttir, Sólveig; Agerbo Rasmussen, Jacob; Chimal Ballesteros, Jesus Adrian; Thor Hallgrimsson, Gunnar; Stefansson, Robert A.; Von Schmalensee, Menja; Haukur Skarphedinsson, Kristinn; Lage Labansen, Aili; Leivits, Madis; Skelmose, Kim; Sonne, Christian; Dietz, Rune; Boertmann, David; Eulaers, Igor; Martin, Michael David; Pálsson, Snæbjörn. (2022) Erratum to: Distinctive mitogenomic lineages within populations of White-tailed Eagles(Ornithology DOI: 10.1093/ornithology/ukab081). The AUK: A Quarterly Journal of Ornithology. volum 139 (3).
    Errata
  • Malmstrom, Carolyn; Martin, Michael David; Gagnevin, Lionel. (2022) Exploring the Emergence and Evolution of Plant Pathogenic Microbes Using Historical and Paleontological Sources. Annual Review of Phytopathology. volum 60.
    Academic literature review
  • Nygaard, Malene; Kopatz, Alexander; Speed, James David Mervyn; Martin, Michael David; Prestø, Tommy; Kleven, Oddmund; Bendiksby, Mika. (2022) Spatiotemporal monitoring of the rare northern dragonhead (Dracocephalum ruyschiana, Lamiaceae) — SNP genotyping and environmental niche modeling herbarium specimens. Ecology and Evolution. volum 12 (8).
    Academic article
  • Aguilar Tomasini, Maria Alejandra; Martin, Michael David; Speed, James David Mervyn. (2021) Assessing spatial patterns of phylogenetic diversity of Mexican mammals for biodiversity conservation. Global Ecology and Conservation. volum 31.
    Academic article
  • Foote, Andrew; Gilbert, Marcus Thomas Pius; Gopalakrishnan, Shyam; Louis, Marie; Martin, Michael David; Morin, Phillip A.; Nykänen, Milaja; Scharff-Olsen, Camilla; Excoffier, Laurent. (2021) Evidence of long-term purging of mutation load in killer whale genomes. bioRxiv - the preprint server for biology.
    Academic article
  • Foote, Andrew; Hooper, Rebecca; Alexander, Alana; Baird, Robin; Baker, Charles Scott; Ballance, Lisa; Barlow, Jay; Brownlow, Andrew; Collins, Tim; Constantine, Rochelle; Rosa, Luciano Dalla; Davison, Nicholas J.; Durban, John; Esteban, Ruth; Excoffier, Laurent; Martin, Sarah; Forney, Karin A.; Gerrodette, Tim; Gilbert, Marcus Thomas Pius. (2021) Runs of homozygosity in killer whale genomes provide a global record of demographic histories. Molecular Ecology. volum 30 (23).
    Academic article
  • Hansen, Charles Christian Riis; Baleka, Sina; Gudjonsdottir, Solveig Magnea; Rasmussen, Jacob Agerbo; Chimal Ballesteros, Jesus Adrian; Hallgrimsson, Gunnar Thor; Stefansson, Robert A.; von Schmalensee, Menja; Skarphédinsson, Kristinn Haukur; Labansen, Aili Lage; Leivits, Madis; Skelmose, Kim; Sonne, Christian; Dietz, Rune; Boertmann, David; Eulaers, Igor; Martin, Michael David; Pálsson, Snæbjörn. (2021) Distinctive mitogenomic lineages within populations of white-tailed eagles (Haliaeetus albicilla). Journal of Ornithology. volum 139 (2).
    Academic article
  • Meleshko, Olena; Martin, Michael David; Korneliussen, Thorfinn Sand; Schröck, Christian; Lamkowski, Paul; Schmutz, Jeremy; Healey, Adam; Piatkowski, Bryan T; Shaw, A. Jonathan; Weston, David J; Flatberg, Kjell Ivar; Szövényi, Péter; Hassel, Kristian; Stenøien, Hans K.. (2021) Extensive genome-wide phylogenetic discordance is due to incomplete lineage sorting and not ongoing introgression in a rapidly radiated bryophyte genus. Molecular Biology and Evolution (MBE). volum 38 (7).
    Academic article
  • Rasmussen, Jacob A.; Villumsen, Kasper Rømer; Duchêne, David; Puetz, Lara; Delmont, Tom; Sveier, Harald; von Gersdorff Jørgensen, Louise; Præbel, Kim; Martin, Michael David; Bojesen, Anders Miki; Gilbert, Marcus Thomas Pius; Kristiansen, Karsten; Limborg, Morten T.. (2021) Genome-resolved metagenomics suggests a mutualistic relationship between Mycoplasma and salmonid hosts. Communications Biology. volum 4.
    Academic article
  • Rawlence, Nicolas J.; Knapp, Michael; Martin, Michael David; Wales, Nathan. (2021) Applied Uses of Ancient DNA. Frontiers in Ecology and Evolution. volum 9.
    Academic article
  • Ristaino, Jean B.; Anderson, Pamela; Bebber, Daniel; Brauman, Kate; Cunniffe, Nik; Fedoroff, Nina; Finegold, Cambria; Garrett, Karen A.; Gilligan, Christopher; Jones, Christopher M.; Martin, Michael David; MacDonald, Graham K.; Neenan, Patricia; Records, Angela; Schmale, David G.; Tateosian, Laura; Wei, Qingshan. (2021) The persistent threat of emerging plant disease pandemics to global food security. Proceedings of the National Academy of Sciences of the United States of America. volum 118 (23).
    Academic article
  • Speed, James David Mervyn; Chimal Ballesteros, Jesus Adrian; Martin, Michael David; Barrio, Isabel C.; Vuorinen, Katariina Elsa Maria; Soininen, Eeva Marjatta. (2021) Will borealization of Arctic tundra herbivore communities be driven by climate warming or vegetation change?. Global Change Biology. volum 27 (24).
    Academic article
  • Bakker, Freek T.; Martin, Michael David; Bieker, Vanessa Carina. (2020) Herbarium Collection-Based Plant Evolutionary Genetics and Genomics. Frontiers in Ecology and Evolution. volum 8.
    Editorial
  • Barnett, Ross; Westbury, Michael V; Sandoval-Velasco, Marcela; Vieira, Filipe G.; Jeon, Sungwon; Zazula, Grant; Martin, Michael David; Ho, Simon Y.W.; Mather, Niklas; Gopalakrishnan, Shyam; Ramos-Madrigal, Jazmín; de Manuel, Marc; Zepeda-Mendoza, Marie Lisandra; Antunes, Agostinho; Carmona Baez, Aldo; De Cahsan, Binia; Larson, Greger; O'Brien, Stephen J.; Eizirik, Eduardo. (2020) Genomic adaptations and evolutionary history of the extinct scimitar-toothed cat, Homotherium latidens. Current Biology. volum 30 (24).
    Academic article
  • Bieker, Vanessa Carina; Sánchez Barreiro, Fatima; Rasmussen, Jacob Agerbo; Brunier, Marie; Wales, Nathan; Martin, Michael David. (2020) Metagenomic analysis of historical herbarium specimens reveals a postmortem microbial community. Molecular Ecology Resources. volum 20.
    Academic article
  • de Manuel, Marc; Barnett, Ross; Sandoval-Velasco, Marcela; Yamaguchi, Nobuyuki; Vieira, Filipe G.; Lisandra Zepeda Mendoza, Zepeda; Liu, Shiping; Martin, Michael David; Sinding, Mikkel-Holger S.; Mak, Sarah Siu Tze; Carøe, Christian; Liu, Shanlin; Guo, Chunxue; Zheng, Jiao; Zazula, Grant; Baryshnikov, Gennady; Eizirik, Eduardo; Koepfli, Klaus-Peter; Johnson, Warren E.. (2020) The evolutionary history of extinct and living lions. Proceedings of the National Academy of Sciences of the United States of America. volum 117 (20).
    Academic literature review
  • Dehasque, Marianne; Ávila-Arcos, María C; Díez-del-Molino, David; Fumagalli, Matteo; Guschanski, Katerina; Lorenzen, Eline D.; Malaspinas, Anna-Sapfo; Marques-Bonet, Tomas; Martin, Michael David; Murray, Gemma G.R.; Papadopulos, Alexander; Therkildsen, Nina Overgaard; Wegmann, Daniel; Dalén, Love; Foote, Andrew. (2020) Inference of natural selection from ancient DNA. Evolution Letters. volum 4 (2).
    Academic article
  • Kistler, Logan; Bieker, Vanessa Carina; Martin, Michael David; Pedersen, Mikkel Winther; Madrigal, Jazmín Ramos; Wales, Nathan. (2020) Ancient plant genomics in archaeology, herbaria, and the environment. Annual Review of Plant Biology. volum 71.
    Academic article
  • Foote, Andrew D.; Martin, Michael David; Louis, Marie; Pacheco, George; Robertson, Kelly M.; Sinding, Mikkel-Holger; Amaral, Ana R.; Baird, Robin; Baker, Charles; Ballance, Lisa; Barlow, Jay; Brownlow, Andrew; Collins, Tim; Constantine, Rochelle; Dabin, Willy; Rosa, Luciano Dalla; Davison, Nicholas J.; Durban, John W.; Esteban, Ruth. (2019) Killer whale genomes reveal a complex history of recurrent admixture and vicariance. Molecular Ecology. volum 28 (14).
    Academic article
  • Maurice, Sundy Ursula Mary Jane; Montes, Melanie; Nielsen, Bent J.; Bødker, Lars; Martin, Michael David; Jønck, Carina; Kjøller, Rasmus; Rosendahl, Søren. (2019) Population genomics of an outbreak of the potato late blight pathogen, Phytophthora infestans, reveals both clonality and high genotypic diversity. Molecular plant pathology. volum 20 (8).
    Academic article
  • Mienna, Ida Marielle; Speed, James David Mervyn; Bendiksby, Mika; Thornhill, Andrew H.; Mishler, Brent D.; Martin, Michael David. (2019) Differential patterns of floristic phylogenetic diversity across a post-glacial landscape. Journal of Biogeography. volum 47.
    Academic article
  • Speed, James David Mervyn; Skjelbred, Ina Åsnes; Barrio, Isabel C.; Martin, Michael David; Berteaux, Dominique; Bueno, C. Guillermo; Christie, Katie S.; Forbes, Bruce C.; Forbey, Jennifer; Fortin, Daniel; Grytnes, John-Arvid; Hoset, Katrine Skamfer; Lecomte, Nicolas; Marteinsdóttir, Bryndís; Mosbacher, Jesper Bruun; Pedersen, Åshild Ønvik; Ravolainen, Virve; Rees, Eileen C.; Skarin, Anna. (2019) Trophic interactions and abiotic factors drive functional and phylogenetic structure of vertebrate herbivore communities across the Arctic tundra biome. Ecography. volum 42 (6).
    Academic article
  • Thomas, Jessica E.; Carvalho, Gary R.; Haile, James; Rawlence, Nicolas J.; Martin, Michael David; Ho, Simon Y.W.; Sigfússon, Arnór Þ.; Jósefsson, Vigfús A.; Frederiksen, Morten; Linnebjerg, Jannie F.; Castruita, Jose A. Samaniego; Niemann, Jonas; Sinding, Mikkel-Holger S.; Sandoval-Velasco, Marcela; Soares, André E.R.; Lacy, Robert; Barilaro, Christina; Best, Julia; Brandis, Dirk. (2019) Demographic reconstruction from ancient DNA supports rapid extinction of the great auk. eLIFE. volum 8:e47509.
    Academic article
  • Bieker, Vanessa Carina; Martin, Michael David. (2018) Implications and future prospects for evolutionary analyses of DNA in historical herbarium collections. Botany Letters. volum 165 (3-4).
    Academic article
  • Martin, Michael David; Quiroz-Claros, Elva; Brush, Grace S.; Zimmer, Elizabeth A.. (2018) Herbarium collection-based phylogenetics of the ragweeds (Ambrosia, Asteraceae). Molecular Phylogenetics and Evolution. volum 120.
    Academic article
  • O’Hanlon, Simon J; Rieux, Adrien; Farrer, Rhys A; Rosa, Gonçalo M; Waldman, Bruce; Bataille, Arnaud; Kosch, Tiffany A; Murray, Kris A; Brankovics, Balázs; Fumagalli, Matteo; Martin, Michael David; Wales, Nathan; Alvarado-Rybak, Mario; Bates, Kieran A.; Berger, Lee R.; Böll, Susanne; Brookes, Lola; Clare, Frances; Courtois, Elodie A.. (2018) Recent Asian origin of chytrid fungi causing global amphibian declines. Science. volum 360.
    Academic article
  • Grube, Martin; Gaya, Ester; Kauserud, Håvard; Smith, Adrian M.; Avery, Simon V.; Fernstad, Sara F.; Muggia, Lucia; Martin, Michael David; Eivindsen, Tove; Kõljalg, Urmas; Bendiksby, Mika. (2017) The next generation fungal diversity researcher. Fungal Biology Reviews. volum 31 (3).
    Academic literature review
  • Martin, Michael David; Jay, Flora; Castellano, Sergi; Slatkin, Montgomery. (2017) Determination of genetic relatedness from low-coverage human genome sequences using pedigree simulations. Molecular Ecology. volum 26 (16).
    Academic article
  • Sánchez Barreiro, Fatima; Vieira, Filipe G.; Martin, Michael D.; Haile, James; Gilbert, Marcus Thomas Pius; Wales, Nathan. (2017) Characterizing restriction enzyme-associated loci in historic ragweed (Ambrosia artemisiifolia) voucher specimens using custom-designed RNA probes. Molecular Ecology Resources. volum 17 (2).
    Academic article
  • Thomas, Jessica E; Carvalho, Gary R.; Haile, James; Martin, Michael David; Castruita, Jose A. Samaniego; Niemann, Jonas; Sinding, Mikkel Holger Strander; Sandoval-Velasco, Marcela; Rawlence, Nicolas J.; Fuller, Errol; Fjeldså, Jon; Hofreiter, Michael; Stewart, John R; Gilbert, Marcus Thomas Pius; Knapp, Michael. (2017) An ‛Aukward’ tale: a genetic approach to discover the whereabouts of the last Great Auks. Genes. volum 8 (6).
    Academic article
  • Foote, Andy; Vijay, Nagarjun; Avila-Arcos, Maria; Baird, Robin; Durban, John; Morin, Phillip; Fumagalli, Matteo; Gibbs, Richard; Hanson, Bradley; Korneliussen, Thorfinn; Martin, Michael D.; Robertson, Kelly; Sousa, Vitor; Vieira, Filipe G.; Vinar, Tomas; Wade, Paul; Worley, Kim; Excoffier, Laurent; Gilbert, M Thomas P. (2016) Genome-culture coevolution drives rapid divergence in the killer whale. Nature Communications. volum 7.
    Academic article
  • Martin, Michael D; Olsen, Morten T; Samaniego, Jose; Zimmer, Elizabeth A; Gilbert, Marcus Thomas Pius. (2016) The population genomic basis of geographic differentiation in North American common ragweed (Ambrosia artemisiifolia L.). Ecology and Evolution. volum 6 (11).
    Academic article
  • Martin, Michael D; Vieira, Filipe G; Ho, Simon Y W; Wales, Nathan; Schubert, Mikkel; Seguin-Orlando, Andaine; Ristaino, Jean B; Gilbert, M Thomas P. (2016) Genomic characterization of a South American Phytophthora hybrid mandates reassessment of the geographic origins of Phytophthora infestans. Molecular Biology and Evolution (MBE). volum 33.
    Academic article
  • Saville, Amanda; Martin, Michael David; Ristaino, Jean B.. (2016) Historic late blight outbreaks caused by a widespread dominant lineage of Phytophthora infestans (Mont.) de Bary. PLOS ONE. volum 11:e0168381 (12).
    Academic literature review
  • Der Sarkissian, Clio; Allentoft, M; Campos, Paula F; Cappellini, Enrico; Ermini, Luca; Fernandez, Ruth; Hansen, Anders J; Korneliussen, Thorfinn; Margaryan, Ashot; Martin, Michael D; Moreno-Mayar, J V; Raghavan, Maanasa; Rasmussen, Morten; Velasco, Marcela Sandoval; Schroeder, Hannes; Schubert, Mikkel; Seguin-Orlando, Andaine; Wales, Nathan; Gilbert, M Thomas P. (2015) Ancient genomics. Philosophical Transactions of the Royal Society of London. Biological Sciences. volum 370.
    Academic literature review
  • Martin, Michael D; Ho, Simon Y W; Wales, Nathan; Ristaino, Jean B; Gilbert, M Thomas P. (2014) Persistence of the mitochondrial lineage of the Irish potato famine pathogen in the New World. Molecular Biology and Evolution (MBE). volum 31.
    Academic article
  • Martin, Michael D; Zimmer, Elizabeth A; Olsen, Morten T; Foote, Andrew D; Gilbert, M Thomas P; Brush, Grace S. (2014) Herbarium specimens reveal a phylogeographic shift in common ragweed during native range disturbance. Molecular Ecology. volum 23.
    Academic article
  • Schubert, Mikkel; Ermini, Luca; Der Sarkissian, Clio; Jónsson, Hákon; Ginolhac, Aurélien; Schaefer, Robert; Fernández, Ruth; Martin, Michael D; Kircher, Martin; McCue, Molly E; Willerslev, Eske; Orlando, Ludovic. (2014) Characterizing ancient genomes: from sequence reads to SNP detection, phylogenomics, and metagenomics analyses. Nature Protocols. volum 9.
    Academic article
  • Zhang, Guojie; Martin, Michael D; et al., -. (2014) Comparative genomics reveals insights into avian genome evolution and adaptation. Science. volum 346 (6215).
    Academic article
  • Martin, Michael D; Cappellini, Enrico; Samaniego, Jose; Zepeda, M. Lisandra; Campos, Paula F; Seguin-Orlando, Andaine; Wales, Nathan; Orlando, Ludovic; Ho, Simon Y W; Dietrich, Fred S; Mieczkowski, Piotr A; Heitman, Joseph; Willerslev, Eske; Krogh, Anders; Ristaino, Jean B; Gilbert, M Thomas P. (2013) Reconstructing genome evolution in historic samples of the Irish potato famine pathogen. Nature Communications. volum 4.
    Academic article
  • Martin, Michael D; Chamecki, Marcelo; Brush, Grace. (2010) Anthesis synchronization and floral morphology determine diurnal patterns of ragweed pollen dispersal. Agricultural and Forest Meteorology. volum 150.
    Academic article
  • Martin, Michael D; Chamecki, Marcelo; Brush, Grace; Meneveau, Charles; Parlange, Marc. (2009) Pollen clumping and wind dispersal in an invasive angiosperm. American Journal of Botany. volum 96.
    Academic article

Media

2023

  • Poster
    Burnett, Hamish Andrew; Bieker, Vanessa Carina; Le Moullec, Mathilde; Peeters, Bart; Rosvold, Jørgen; Pedersen, Åshild Ønvik; Dalén, Love; Loe, Leif Egil; Jensen, Henrik; Hansen, Brage Bremset; Martin, Michael David. (2023) Contrasting genomic consequences of anthropogenic reintroduction and natural recolonisation in high-arctic wild reindeer. OIKOS Norway 2023 . Norwegian University of Life Sciences; Ås, Norway. 2023-02-13 - 2023-02-15.
  • Academic lecture
    Kellner, Fabian Laszlo; Bieker, Vanessa Carina; Brealey, Jaelle; Martin, Michael David. (2023) The use of dental calculus in metagenomic research on ancient reindeer. North American Caribou Workshop and Arctic Ungulate Conference 2023 . Arctic Ungulate Society; Anchorage, Alaska, USA. 2023-05-08 - 2023-05-12.
  • Lecture
    Kellner, Fabian Laszlo; Le Moullec, Mathilde; Bieker, Vanessa Carina; Hansen, Brage Bremset; Martin, Michael David. (2023) Including ancient DNA to understand implications of historical overharvest, recolonization and climate change for the genetic diversity and structure of high-Arctic wild Svalbard reindeer. North American Caribou Workshop/Arctic Ungulate Conference ; Anchorage, Alaska. 2023-05-08 - 2023-05-12.
  • Academic lecture
    Lefeuvre, Maël; Martin, Michael David; Jay, Flora; Marsolier, Marie-Claude; Bon, Céline. (2023) GRUPS-rs, a high-performance ancient DNA genetic relatedness estimation software relying on pedigree simulations. Les Journées Ouvertes en Biologie, Informatique et Mathématiques (JOBIM) . Société Française de BioInformatique (SFBI); Multiple locations. 2023-06-27 - 2023-06-30.
  • Academic lecture
    Matten, Damaris Marina; Bendiksby, Mika; Martin, Michael David; Speed, James David Mervyn. (2023) Spatial patterns of species and phylogenetic diversity of vascular plants in Norway and Fennoscandia. 2023 ESA Annual Meeting . Ecological Society of America; Portland, Oregon. 2023-08-06 - 2023-08-11.

2022

  • Academic lecture
    Bieker, Vanessa Carina; Battlay, Paul; Petersen, Bent; Sun, Xin; Brealey, Jaelle C.; Hodgins, Kathryn A.; Martin, Michael David. (2022) Hologenomic analysis of hundreds of herbarium specimens reveals the genomic basis of a plant invasion. Applied Hologenomics Conference ; Bilbao. 2022-09-13 - 2022-09-15.
  • Academic lecture
    Bieker, Vanessa Carina; Martin, Michael David. (2022) Darwin’s giant daisies: Population genomics within the Scalesia genus. ForBio Annual meeting . ForBio; 2022-11-28 - 2022-11-30.
  • Academic lecture
    Bieker, Vanessa Carina; Martin, Michael David. (2022) Genome-metagenome association in the radiation of Darwin’s giant daisies. Galapagos research meeting ; 2022-11-15.
  • Academic lecture
    Brealey, Jaelle; Kodama, Miyako; Rasmussen, Jacob A.; Hansen, Søren B.; Santos-Bay, Luisa; Hansen, Martin; Fjære, Even; Myrmel, Lene Secher; Madsen, Lise; Bernhard, Annette; Kristiansen, Karsten; Sveier, Harald; Gilbert, Marcus Thomas Pius; Martin, Michael David; Limborg, Morten T.. (2022) Leveraging microbiota services through hologenomic analyses to improve gut health in farmed salmon. Applied Hologenomics Conference . HoloFood; Bilbao, Spain. 2022-09-14 - 2022-09-14.
  • Poster
    Brealey, Jaelle; Lecaudey, Laurene Alicia; Kodama, Miyako; Rasmussen, Jacob A; Hansen, Martin; Sveier, Harald; Dheilly, Nolwenn M.; Martin, Michael David; Limborg, Morten T.. (2022) Hologenomic Approach to Understanding Cestode Infections in Farmed Atlantic Salmon. International Congress of Parasitology . World Federation of Parasitologists; Copenhagen, Denmark. 2022-08-22 - 2022-08-22.

2021

  • Academic lecture
    Brealey, Jaelle; Lecaudey, Laurene Alicia; Kodama, Miyako; Rasmussen, Jacob A.; Sveier, Harald; Dheilly, Nolwenn M.; Martin, Michael David; Limborg, Morten T.. (2021) Microbiome inception: an intestinal cestode causes a hierarchical landscape of distinct microbial communities nested within farmed Atlantic salmon (Salmo salar). Aquaculture Europe 2021 . European Aquaculture Society; Funchal, Madeira. 2021-10-04 - 2021-10-07.
  • Academic lecture
    Brealey, Jaelle; Lecaudey, Laurene Alicia; Kodama, Miyako; Rasmussen, Jacob A.; Sveier, Harald; Dheilly, Nolwenn M.; Martin, Michael David; Limborg, Morten T.. (2021) Microbiome inception: an intestinal cestode shapes a hierarchical landscape of distinct microbial communities nested within the host. European Multicolloquium of Parasitology 2021 . European Federation of Parasitologists; Belgrade. 2021-10-12 - 2021-10-16.
  • Academic lecture
    Cerca, José; Martin, Michael David. (2021) A chromosome-resolved genome of Darwin’s giant daisy trees (Scalesia) shows the genomic basis of the plant island syndrome. The International Compositae Alliance ; Online. 2021-10-25 - 2021-10-25.
  • Academic lecture
    Cerca, José; Martin, Michael David. (2021) Genome Evolution in Galápagos' Daisies. Department Seminar ; 2021-05-01 - 2021-05-01.
  • Lecture
    Martin, Michael David. (2021) An introduction to the ColdRein project. CBD lunch seminar series . Centre for Biodiversity Dynamics; Trondheim, Norway. 2021-10-12 - 2021-10-12.
  • Academic lecture
    Martin, Michael David; Cerca, José; Bieker, Vanessa Carina. (2021) Holomuseomics group introduction and a glimpse into our plant-related activities. CEES Seminar Series . Centre for Ecological and Evolutionary Synthesis; University of Oslo. Oslo, Norway. 2021-02-05 - 2021-02-05.

2020

  • Poster
    Bieker, Vanessa Carina; Hodgins, Kathryn; Martin, Michael David. (2020) Assessing 180 years of genomic and metagenomic evolution in an invasive plant (Ambrosia artemisiifolia L.). SMBE 2020 Meeting ; Quebec City. 2020-06-28 - 2020-07-02.
  • Academic lecture
    Bieker, Vanessa Carina; Hodgins, Kathryn; Martin, Michael David. (2020) Inferring plant genome evolution of an invasive species (Ambrosia artemisiifolia L.) using historic herbarium specimens. Plant and Animal Genome XXVIII ; San Diego, California. 2020-01-11 - 2020-01-15.
  • Academic lecture
    Brealey, Jaelle C.; Santos-Bay, Luisa; Rasmussen, Jacob A; Lecaudey, Laurene Alicia; Kristiansen, Karsten; Madsen, Lise; Fjære, Even; Secher Myrmel, Lene; Hansen, Martin; Sveier, Harald; Kodama, Miyako; Gilbert, Thomas; Limborg, Morten T.; Martin, Michael David. (2020) HoloFish: Microbiome-genomic co-optimisation to improve gut health in farmed salmon. SMBE 2020 Meeting ; Quebec City. 2020-06-28 - 2020-07-02.
  • Poster
    Maria Alejandra, Aguila Tomasini; Martin, Michael David; Speed, James David Mervyn. (2020) Assessing spatial patterns of phylogenetic diversity in Mexican mammals for biodiversity conservation. Nordic Ecological Society Conference . Nordic Ecological Society; Reykjavik. 2020-03-03 - 2020-03-05.
  • Poster
    Matten, Damaris Marina; Bendiksby, Mika; Martin, Michael David; Speed, James David Mervyn. (2020) Phylogenetic diversity of Fennoscandian vascular plants: Do we protect the relevant areas?. ForBio Annual meeting 2020 . ForBio - Research School in Biosystematics; 2020-12-03 - 2020-12-04.
  • Poster
    Matten, Damaris Marina; Bendiksby, Mika; Martin, Michael David; Speed, James David Mervyn. (2020) Phylogenetic diversity of Fennoscandian vascular plants: Do we protect the relevant areas?. Festival of Ecoolgy 2020 . British Ecological Society; 2020-12-14 - 2020-12-18.

2019

  • Poster
    Ballesteros, Jesús A.; Speed, James David Mervyn; Martin, Michael David. (2019) Arctic and boreal herbivore biodiversity: What drives it and where is it?. Norwegian Ecological Society . Norwegian Ecological Society; Tromsø. 2019-02-11 - 2019-02-13.
  • Academic lecture
    Bieker, Vanessa Carina; Sánchez Barreiro, Fatima; Brunier, Marie; Wales, Nathan; Martin, Michael David. (2019) Metagenomic analysis reveals a postmortem microbial community in historical herbarium specimens. ForBio Annual Meeting 2019 ; Trondheim. 2019-04-08 - 2019-04-10.
  • Poster
    James, Doonan; Gilbert, Thomas; Budde, Katharina; Martin, Michael David; Heuertz, Myriam; Kosawang, Chatchai; Kjær, Erik Dahl; Nielsen, Lene Rostgaard. (2019) AshAdapt – Evolutionary potential of Fraxinus excelsior populations challenged by invasive pests and pathogens. NordGen Forest Conference 2019 ; Hveragerði. 2019-09-17 - 2019-09-19.
  • Academic lecture
    Meleshko, Olena; Hassel, Kristian; Stenøien, Hans K.; Martin, Michael David; Szövényi, Péter. (2019) Speciation with gene flow in peatmosses - using whole genome sequencing to explore gene flow within and among species. ForBio Annual Meeting 2019 . ForBio, NTNU; Trondheim. 2019-04-08 - 2019-04-10.
  • Academic lecture
    Meleshko, Olena; Hassel, Kristian; Stenøien, Hans K.; Martin, Michael David; Szövényi, Péter. (2019) Speciation with gene flow in peatmosses ‐ using whole genome sequencing to explore gene flow within and among species. International Association of Bryologists (IAB) and the International Molecular Moss Science Society Conference . International Association of Bryologists; Mardid, Spain. 2019-07-06 - 2019-07-13.

2018

  • Academic lecture
    Bieker, Vanessa Carina; Hodgins, Kathryn; Martin, Michael David. (2018) Using historical herbarium specimens of an invasive plant species (Ambrosia artemisiifolia L.) for evolutionary genomics. ForBio annual meeting 2018 . ForBio; Tromsø. 2018-02-12 - 2018-02-14.
  • Poster
    Mienna, Ida Marielle; Speed, James David Mervyn; Martin, Michael David; Bendiksby, Mika; Thornhill, Andrew H; Mishler, Brent D. (2018) Patterns and drivers of vascular plant phylogenetic diversity and endemism across Norway. Oikos 2018 ; Trondheim. 2018-02-20 - 2018-02-22.
  • Academic lecture
    Mienna, Ida Marielle; Speed, James David Mervyn; Martin, Michael David; Bendiksby, Mika; Thornhill, Andrew H; Mishler, Brent D. (2018) The Spatial Distribution Of Phylogenetic Diversity And Endemism In The Norwegian Vascular Flora. ForBio annual meeting 2018 ; Tromsø. 2018-02-12 - 2018-02-14.

2017

  • Poster
    Bieker, Vanessa C; Sánchez Barreiro, Fatima; Vieira, Filipe G.; Wales, Nathan; Bretagnolle, François; Gilbert, M. Thomas P.; Hodgins, Kathryn; Martin, Michael David. (2017) Using historical herbarium specimens to investigate plant genome evolution during parallel invasions (Ambrosia artemisiifolia L.). ForBio Annual Meeting 2017 . ForBio Research School in Biosystematics; Bergen. 2017-04-24 - 2017-04-26.
  • Lecture
    Martin, Michael David. (2017) Comparative and population genomic analyses of the Irish potato famine pathogen Phytophthora infestans. Séminare Genetrop . Institut de Recherche pour le Développement; Montpellier. 2017-04-25.
  • Academic lecture
    Martin, Michael David. (2017) Genomic prospecting in herbarium collections. Botany Seminar series . Muséum National d'Histoire Naturelle; Paris. 2017-07-04.
  • Lecture
    Martin, Michael David. (2017) Genomic prospecting in natural history collections. Australian Tropical Herbarium Science Circle . Australian Tropical Herbarium / James Cook University; Cairns. 2017-01-27.
  • Lecture
    Martin, Michael David. (2017) Population genomics of the potato blight pathogen Phytophthora infestans. CIME/NFM Microbial Evolution meeting . CIME; Oslo. 2017-10-27.
  • Academic lecture
    Martin, Michael David. (2017) Potentials for herbarium genetics and genomics. Herbarium genomics workshop . Australian Tropical Herbarium; Cairns. 2017-01-18 - 2017-01-18.
  • Lecture
    Martin, Michael David. (2017) Promise and prospects for genomic analyses from natural history collections. Norwegian Biochemical Society Trøndelag meeting 2017 . Norwegian Biochemical Society Trøndelag; Oppdall. 2017-03-22.
  • Lecture
    Martin, Michael David. (2017) Realizing the potential for herbarium collection-based genomic analyses. Seminar before PhD defense of Natalie Ahlstrand . Section for EvoGenomics, Natural History Museum of Denmark; Copenhagen. 2017-10-06.
  • Poster
    Mienna, Ida M; Thornhill, Andrew H; Mishler, Brent D; Bendiksby, Mika; Speed, James David Mervyn; Martin, Michael David. (2017) Spatial phylogenetics of the Norwegian vascular plant flora. 3rd Conference of the Norwegian Ecological Society . UiO Centre for Ecological and Evolutionary Synthesis; Oslo. 2017-01-12 - 2017-01-13.
  • Interview
    Pappas, Stephanie; Martin, Michael David. (2017) Genetics say the origins of the Irish potato blight were South American. Washington Post [Avis]. 2017-01-07.
  • Poster
    Skjelbred, Ina Å; Thornhill, Andrew H; Martin, Michael David; Speed, James David Mervyn. (2017) Phylogenetic diversity of Arctic vertebrate herbivores. 3rd Conference of the Norwegian Ecological Society . UiO Centre for Ecological and Evolutionary Synthesis; Oslo. 2017-01-12 - 2017-01-13.
  • Poster
    Speed, James David Mervyn; Soininen, Eeva M; Skjelbred, Ina Åsnes; Martin, Michael David; Barrio, Isabel C. (2017) Phylogenetic and functional composition of Arctic herbivore assemblages. 3rd Symposium on Ecological Networks and 3rd Symposium on Molecular Analysis . SLU; Uppsala. 2017-09-11 - 2017-09-15.

2016

  • Interview
    Brandslet, Steinar; Martin, Michael David. (2016) The potato plague that changed the world. Aftenposten Historie 8, pp. 40-41 [Tidsskrift]. 2016-08-01.
  • Interview
    Brandslet, Steinar; Martin, Michael David. (2016) The weeds that settlers spread. AlphaGalileo [Internett]. 2016-11-21.
  • Lecture
    Martin, Michael David. (2016) Common ragweed population genomics from historical herbarium vouchers. Botany 2016 . Botanical Society of America; Savannah, Georgia. 2016-07-30 - 2016-08-03.
  • Academic lecture
    Martin, Michael David. (2016) Evolutionary genomics of Phytophthora infestans. Symposium on Emerging Plant Disease and Global Food Security . North Carolina State University; Raleigh, North Carolina. 2016-03-23 - 2016-03-24.
  • Academic lecture
    Martin, Michael David. (2016) Herbarium specimen population genomics with a special focus on common ragweed. Ecology & Evolution Research Seminar Series . Department of Biology, University of Fribourg; Fribourg. 2016-05-12 - 2016-05-12.
  • Academic lecture
    Martin, Michael David. (2016) Museum and herbarium collections as genomic repositories. ForBio Research School in Biosystematics Annual Meeting . Norwegian University of Science and Technology; Trondheim. 2016-04-25 - 2016-04-27.
  • Lecture
    Martin, Michael David. (2016) Phylogenomics and transcriptomics of Galápagos daisy trees. Botany 2016 . Botanical Society of America; Savannah, Georgia. 2016-07-30 - 2016-08-03.
  • Interview
    Martin, Michael David; Brandslet, Steinar. (2016) The potato disease that changed the world. Gemini [Internett]. 2016-06-01.
  • Poster
    Martin, Michael David; Olsen, Morten Tange; Samaniego, Jose A; Zimmer, Elizabeth A; Gilbert, M Thomas P. (2016) The population genomic basis of geographic differentiation in North American common ragweed. Botany 2016 . Botanical Society of America; Savannah, Georgia. 2016-07-30 - 2016-08-03.
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