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  1. Employees

Språkvelger

Norsk

Rune Sætre

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Foto:

Rune Sætre

Asc. Prof, and Employee Representative Tekna/Akad NTNU
Department of Computer Science
Faculty of Information Technology and Electrical Engineering

satre@ntnu.no
+4773596101 309 PTS 2 Valgrinda, Trondheim
Twitter ResearchGate Google Scholar Rune Sætre Tekna / Akad NTNU
About Research Publications Teaching Outreach

About

CV

Private page: http://www.idi.ntnu.no/~satre

  • Artificial Intelligence (AI).
    • The Bus-OrakelAtB Trondheim
    • LLM: Large Language Models (Norway, Japan)
  • Health-research, Bio(-medical-)NLP
  • FastlegeVakten Notification Service

Group: Information Systems and Software Engineering (Campus photos)

Union Board Member: Tekna NTNU (Akademikerne)

Projects: PAsTAs,  TUC

Interests: 

  • Health informatics research: PAsTAs, and BioNLP
  • Teaching several IT courses on BSc, MSc and PhD level

Publications:

  • Cristin ( Index - Norwegian Universities Research Results )
  • Google Scholar, DBLP, CiteSeer

Teaching last 10 years:

  • Procedural and Object-Oriented Programming.
    • Python
    • C++
    • Java
  • Semantic Web (Examiner)

Research

  • Miyao-lab, U of Tokyo, Japan
  • Tsuruoka-lab

Nye Store Språkmodeller, i Norge

Ønsker å sammenligne utviklingen av den Store Norske GPT og Japans GPT, siden støtten for Norsk og Japansk er omtrent jevngod i OpenAI's GPT-modeller.

Publications

  • Chronological
  • By category
  • See all publications in Cristin

2024

  • Dev, Aamin; Asakura, Takuto; Sætre, Rune. (2024) An Approach to Co-reference Resolution and Formula Grounding for Mathematical Identifiers Using Large Language Models. Association for Computational Linguistics
    Academic chapter/article/Conference paper
  • Chen, Bowen; Sætre, Rune; Miyao, Yusuke. (2024) A Comprehensive Evaluation of Inductive Reasoning Capabilities and Problem Solving in Large Language Models. Association for Computational Linguistics
    Academic chapter/article/Conference paper

2019

  • Krüger, Andreas; Setalid, Marius; Skari, Even Letting; Sætre, Rune. (2019) NOLAS Insights Systemizing operational characteristics in an organization consisting of several functional units. NTNU
    Masters thesis
  • Wang, Alf Inge; Sætre, Rune; Rydland, Terje; Dahl, Yngve. (2019) Evaluation of Interactive and Gamified Approaches for Teaching ICT Theory - A Study of PowerPoint, Sembly, and Kahoot!. Proceedings of the European Conference on Games Based Learning (ECGBL)
    Academic article

2017

  • Marsi, Erwin; Sikdar, Utpal Kumar; Marco, Cristina; Barik, Biswanath; Sætre, Rune. (2017) NTNU-1@ScienceIE at SemEval-2017 Task 10: Identifying and Labelling Keyphrases with Conditional Random Fields. Association for Computational Linguistics
    Academic chapter/article/Conference paper

2016

  • Wang, Alf Inge; Zhu, Meng; Sætre, Rune. (2016) The Effect of Digitizing and Gamifying Quizzing in Classrooms. Academic Conferences and Publishing International Limited
    Academic chapter/article/Conference paper
  • Sætre, Rune; Nytrø, Øystein; Nordbø, Stein Jakob; Steinsbekk, Aslak. (2016) Visual exploration and cohort identification of acute patient histories aggregated from heterogeneous sources. IEEE (Institute of Electrical and Electronics Engineers)
    Academic chapter/article/Conference paper
  • Bøhler, Henrik; Asla, Petter Fagerlund; Marsi, Erwin; Sætre, Rune. (2016) IDI@NTNU at SemEval-2016 Task 6: Detecting Stance in Tweets Using Shallow Features and GloVe Vectors for Word Representation. Association for Computational Linguistics
    Academic chapter/article/Conference paper

2015

  • Dahl, Unni Alice; Johnsen, Roar; Sætre, Rune; Steinsbekk, Aslak. (2015) The influence of an intermediate care hospital on health care utilization among elderly patients - a retrospective comparative cohort study. BMC Health Services Research
    Academic article

2014

  • Steinsbekk, Aslak; Berntsen, Gro Karine Rosvold; Schrader, Per; Sætre, Rune; Nytrø, Øystein. (2014) Patients Judgment of Their Trajectories. International Journal of Integrated Care (IJIC)
    Abstract

2013

  • Stav, Erlend; Floch, Jacqueline; Khan, Mohammad Ullah; Sætre, Rune. (2013) Using Meta-modelling for Construction of an End-User Development Framework. Springer
    Academic chapter/article/Conference paper

2012

  • Andersstuen, Runar; Engell, Trond Bøe; Sætre, Rune; Gambäck, Björn. (2012) A Multiple Platform Approach to Building a Bus Route Information System for Mobile Devices. GI-Edition Lecture Notes in Informatics (LNI)
    Academic article
  • Marcussen, Christian Jun; Eliassen, Lars Moland; Sætre, Rune; Gambäck, Björn. (2012) Context-Awareness and Real-Time Information in an Intelligent Smartphone Application. GI-Edition Lecture Notes in Informatics (LNI)
    Academic article
  • Sætre, Rune; Gulla, Jon Atle. (2012) FastlegeVakten.
    Software

2011

  • Sætre, Rune; Khan, Mohammad Ullah; Stav, Erlend; Fernandez, Alfredo Perez; Herrmann, Peter Michael; Gulla, Jon Atle. (2011) Towards Ontology-Driven End-User Composition of Personalized Mobile Services. Lecture Notes in Computer Science (LNCS)
    Academic article
  • Kocbek, Simon; Sætre, Rune; Gregor, Stiglic; Kim, Jin-Dong; Pernek, Igor; Tsuruoka, Yoshimasa. (2011) Analysis of Gene Ranking Algorithms with Extraction of Relevant Biomedical Concepts from PubMed Publications. IEEE conference proceedings
    Academic chapter/article/Conference paper
  • Rinaldi, Fabio; Kaljurand, Kaarel; Sætre, Rune. (2011) Terminological resources for text mining over biomedical scientific literature. Artificial Intelligence in Medicine
    Academic article
  • Arighi, Cecilia N; Roberts, Phoebe M; Shashank, Agarwal; Bhattacharya, Sanmitra; Gianni, Cesareni; Chatr-aryamontri, Andrew. (2011) BioCreative III interactive task: an overview. BMC Bioinformatics
    Academic article
  • Kano, Yoshinobu; Björne, Jari; Ginter, Filip; Salakoski, Tapio; Buyko, Ekaterina; Hahn, Udo. (2011) U-Compare bio-event meta-service: compatible BioNLP event extraction services. BMC Bioinformatics
    Academic article
  • Riedel, Sebastian; Sætre, Rune; Chun, Hong-Woo; Takagi, Toshihisa; Tsujii, Jun'ichi. (2011) BIO-MOLECULAR EVENT EXTRACTION WITH MARKOV LOGIC. Computational Intelligence
    Academic article
  • Kocbek, Simon; Sætre, Rune; Stiglic, Gregor; Kim, Jin-Dong; Pernek, Igor; Tsuruoka, Yoshimasa. (2011) AGRA: analysis of gene ranking algorithms. Bioinformatics
    Academic article
  • Floch, Jacqueline; Herrmann, Peter Michael; Khan, Mohammad Ullah; Sanders, Richard; Stav, Erlend; Sætre, Rune. (2011) End-User Service Composition in Mobile Pervasive Environments. Lecture Notes in Computer Science (LNCS)
    Abstract
  • Sætre, Rune; Khan, Mohammad Ullah; Herrmann, Peter Michael. (2011) End-user Composition of Web-based Services: The “Plus Alpha” Approach. Tapir Akademisk Forlag
    Other

2010

  • Ohta, Tomoko; Matsuzaki, Takuya; Okazaki, Naoaki; Miwa, Makoto; Sætre, Rune; Pyysalo, Sampo. (2010) Medie and Info-pubmed: 2010 update. BMC Bioinformatics
    Academic article
  • Sætre, Rune; Yoshida, Kazuhiro; Miwa, Makoto; Matsuzaki, Takuya; Yoshinobu, Kano; Tsujii, Jun'ichi. (2010) Extracting Protein-Interactions from Text with the Unified AkaneRE Event Extraction System. IEEE/ACM Transactions on Computational Biology & Bioinformatics
    Academic article
  • Wang, Yue; Kim, Jin-Dong; Sætre, Rune; Pyysalo, Sampo; Ohta, Tomoko; Tsujii, Jun'ichi. (2010) Improving the Inter-corpora Compatibility for Protein Annotations. Journal of Bioinformatics and Computational Biology
    Academic article
  • Miwa, Makoto; Sætre, Rune; Kim, Jin-Dong; Tsujii, Jun'ichi. (2010) Event Extraction with Complex Event Classification Using Rich Features. Journal of Bioinformatics and Computational Biology
    Academic article

2009

  • Wang, Yue; Kim, Jin-Dong; Sætre, Rune; Pyysalo, Sampo; Tsujii, Jun'ichi. (2009) Investigating heterogeneous protein annotations toward cross-corpora utilization. BMC Bioinformatics
    Academic article
  • Miwa, Makoto; Sætre, Rune; Miyao, Yusuke; Tsujii, Jun'ichi. (2009) Protein-Protein Interaction Extraction by Leveraging Multiple Kernels and Parsers. International Journal of Medical Informatics
    Academic article

2008

  • Leitner, Florian; Krallinger, Martin; Rodriguez-Penagos, Carlos; Hakenberg, Jörg; Plake, Conrad; Kuo, Cheng-Ju. (2008) Introducing meta-services for biomedical information extraction. Genome Biology
    Academic article
  • Miyao, Yusuke; Sagae, Kenji; Sætre, Rune; Matsuzaki, Takuya; Tsujii, Jun'ichi. (2008) Evaluating Contributions of Natural Language Parsers to Protein-Protein Interaction Extraction. Bioinformatics
    Academic article

2007

  • Sætre, Rune; Ranang, Martin Thorsen; Steigedal, Tonje Strømmen; Stunes, Kamilla; Misund, Kristine; Thommesen, Liv. (2007) Webprot : online mining and annotation of biomedical literature using Google. Nova Science Publishers
    Academic chapter/article/Conference paper

2006

  • Sætre, Rune; Søvik, Harald; Amble, Tore; Tsuruoka, Yoshimasa. (2006) GeneTUC, GENIA and Google: Natural Language Understanding in Molecular Biology Literature. Lecture Notes in Computer Science (LNCS)
    Academic article
  • Sætre, Rune; Amble, Tore. (2006) GeneTUC: Natural Language Understanding in Medical Text. Doktoravhandlinger ved NTNU (59)
    Doctoral dissertation

2005

  • Sætre, Rune; Tveit, Amund; Ranang, Martin Thorsen; Steigedal, Tonje Strømmen; Thommesen, Liv; Stunes, Kamilla. (2005) gProt: Annotating protein interactions using Google and Gene Ontology. Springer
    Academic chapter/article/Conference paper
  • Sætre, Rune; Tveit, Amund; Ranang, Martin Thorsen; Strømmen, Tonje; Thommesen, Liv; Stunes, Astrid Kamilla. (2005) gProt: Annotating Protein Interactions Using Google and Gene Ontology. Lecture Notes in Computer Science (LNCS)
    Academic article
  • Sætre, Rune; Tveit, Amund; Strømmen, Tonje; Lægreid, Astrid. (2005) Semantic annotation of biomedical literature using Google. Lecture Notes in Computer Science (LNCS)
    Academic article
  • Tveit, Amund; Sætre, Rune; Strømmen, Tonje; Lægreid, Astrid. (2005) ProtChew: Automatic Extraction of Protein Names from Biomedical Literature. Proceedings - International Conference on Data Engineering
    Academic article

Journal publications

  • Wang, Alf Inge; Sætre, Rune; Rydland, Terje; Dahl, Yngve. (2019) Evaluation of Interactive and Gamified Approaches for Teaching ICT Theory - A Study of PowerPoint, Sembly, and Kahoot!. Proceedings of the European Conference on Games Based Learning (ECGBL)
    Academic article
  • Dahl, Unni Alice; Johnsen, Roar; Sætre, Rune; Steinsbekk, Aslak. (2015) The influence of an intermediate care hospital on health care utilization among elderly patients - a retrospective comparative cohort study. BMC Health Services Research
    Academic article
  • Steinsbekk, Aslak; Berntsen, Gro Karine Rosvold; Schrader, Per; Sætre, Rune; Nytrø, Øystein. (2014) Patients Judgment of Their Trajectories. International Journal of Integrated Care (IJIC)
    Abstract
  • Andersstuen, Runar; Engell, Trond Bøe; Sætre, Rune; Gambäck, Björn. (2012) A Multiple Platform Approach to Building a Bus Route Information System for Mobile Devices. GI-Edition Lecture Notes in Informatics (LNI)
    Academic article
  • Marcussen, Christian Jun; Eliassen, Lars Moland; Sætre, Rune; Gambäck, Björn. (2012) Context-Awareness and Real-Time Information in an Intelligent Smartphone Application. GI-Edition Lecture Notes in Informatics (LNI)
    Academic article
  • Sætre, Rune; Khan, Mohammad Ullah; Stav, Erlend; Fernandez, Alfredo Perez; Herrmann, Peter Michael; Gulla, Jon Atle. (2011) Towards Ontology-Driven End-User Composition of Personalized Mobile Services. Lecture Notes in Computer Science (LNCS)
    Academic article
  • Rinaldi, Fabio; Kaljurand, Kaarel; Sætre, Rune. (2011) Terminological resources for text mining over biomedical scientific literature. Artificial Intelligence in Medicine
    Academic article
  • Arighi, Cecilia N; Roberts, Phoebe M; Shashank, Agarwal; Bhattacharya, Sanmitra; Gianni, Cesareni; Chatr-aryamontri, Andrew. (2011) BioCreative III interactive task: an overview. BMC Bioinformatics
    Academic article
  • Kano, Yoshinobu; Björne, Jari; Ginter, Filip; Salakoski, Tapio; Buyko, Ekaterina; Hahn, Udo. (2011) U-Compare bio-event meta-service: compatible BioNLP event extraction services. BMC Bioinformatics
    Academic article
  • Riedel, Sebastian; Sætre, Rune; Chun, Hong-Woo; Takagi, Toshihisa; Tsujii, Jun'ichi. (2011) BIO-MOLECULAR EVENT EXTRACTION WITH MARKOV LOGIC. Computational Intelligence
    Academic article
  • Kocbek, Simon; Sætre, Rune; Stiglic, Gregor; Kim, Jin-Dong; Pernek, Igor; Tsuruoka, Yoshimasa. (2011) AGRA: analysis of gene ranking algorithms. Bioinformatics
    Academic article
  • Floch, Jacqueline; Herrmann, Peter Michael; Khan, Mohammad Ullah; Sanders, Richard; Stav, Erlend; Sætre, Rune. (2011) End-User Service Composition in Mobile Pervasive Environments. Lecture Notes in Computer Science (LNCS)
    Abstract
  • Ohta, Tomoko; Matsuzaki, Takuya; Okazaki, Naoaki; Miwa, Makoto; Sætre, Rune; Pyysalo, Sampo. (2010) Medie and Info-pubmed: 2010 update. BMC Bioinformatics
    Academic article
  • Sætre, Rune; Yoshida, Kazuhiro; Miwa, Makoto; Matsuzaki, Takuya; Yoshinobu, Kano; Tsujii, Jun'ichi. (2010) Extracting Protein-Interactions from Text with the Unified AkaneRE Event Extraction System. IEEE/ACM Transactions on Computational Biology & Bioinformatics
    Academic article
  • Wang, Yue; Kim, Jin-Dong; Sætre, Rune; Pyysalo, Sampo; Ohta, Tomoko; Tsujii, Jun'ichi. (2010) Improving the Inter-corpora Compatibility for Protein Annotations. Journal of Bioinformatics and Computational Biology
    Academic article
  • Miwa, Makoto; Sætre, Rune; Kim, Jin-Dong; Tsujii, Jun'ichi. (2010) Event Extraction with Complex Event Classification Using Rich Features. Journal of Bioinformatics and Computational Biology
    Academic article
  • Wang, Yue; Kim, Jin-Dong; Sætre, Rune; Pyysalo, Sampo; Tsujii, Jun'ichi. (2009) Investigating heterogeneous protein annotations toward cross-corpora utilization. BMC Bioinformatics
    Academic article
  • Miwa, Makoto; Sætre, Rune; Miyao, Yusuke; Tsujii, Jun'ichi. (2009) Protein-Protein Interaction Extraction by Leveraging Multiple Kernels and Parsers. International Journal of Medical Informatics
    Academic article
  • Leitner, Florian; Krallinger, Martin; Rodriguez-Penagos, Carlos; Hakenberg, Jörg; Plake, Conrad; Kuo, Cheng-Ju. (2008) Introducing meta-services for biomedical information extraction. Genome Biology
    Academic article
  • Miyao, Yusuke; Sagae, Kenji; Sætre, Rune; Matsuzaki, Takuya; Tsujii, Jun'ichi. (2008) Evaluating Contributions of Natural Language Parsers to Protein-Protein Interaction Extraction. Bioinformatics
    Academic article
  • Sætre, Rune; Søvik, Harald; Amble, Tore; Tsuruoka, Yoshimasa. (2006) GeneTUC, GENIA and Google: Natural Language Understanding in Molecular Biology Literature. Lecture Notes in Computer Science (LNCS)
    Academic article
  • Sætre, Rune; Tveit, Amund; Ranang, Martin Thorsen; Strømmen, Tonje; Thommesen, Liv; Stunes, Astrid Kamilla. (2005) gProt: Annotating Protein Interactions Using Google and Gene Ontology. Lecture Notes in Computer Science (LNCS)
    Academic article
  • Sætre, Rune; Tveit, Amund; Strømmen, Tonje; Lægreid, Astrid. (2005) Semantic annotation of biomedical literature using Google. Lecture Notes in Computer Science (LNCS)
    Academic article
  • Tveit, Amund; Sætre, Rune; Strømmen, Tonje; Lægreid, Astrid. (2005) ProtChew: Automatic Extraction of Protein Names from Biomedical Literature. Proceedings - International Conference on Data Engineering
    Academic article

Part of book/report

  • Dev, Aamin; Asakura, Takuto; Sætre, Rune. (2024) An Approach to Co-reference Resolution and Formula Grounding for Mathematical Identifiers Using Large Language Models. Association for Computational Linguistics
    Academic chapter/article/Conference paper
  • Chen, Bowen; Sætre, Rune; Miyao, Yusuke. (2024) A Comprehensive Evaluation of Inductive Reasoning Capabilities and Problem Solving in Large Language Models. Association for Computational Linguistics
    Academic chapter/article/Conference paper
  • Marsi, Erwin; Sikdar, Utpal Kumar; Marco, Cristina; Barik, Biswanath; Sætre, Rune. (2017) NTNU-1@ScienceIE at SemEval-2017 Task 10: Identifying and Labelling Keyphrases with Conditional Random Fields. Association for Computational Linguistics
    Academic chapter/article/Conference paper
  • Wang, Alf Inge; Zhu, Meng; Sætre, Rune. (2016) The Effect of Digitizing and Gamifying Quizzing in Classrooms. Academic Conferences and Publishing International Limited
    Academic chapter/article/Conference paper
  • Sætre, Rune; Nytrø, Øystein; Nordbø, Stein Jakob; Steinsbekk, Aslak. (2016) Visual exploration and cohort identification of acute patient histories aggregated from heterogeneous sources. IEEE (Institute of Electrical and Electronics Engineers)
    Academic chapter/article/Conference paper
  • Bøhler, Henrik; Asla, Petter Fagerlund; Marsi, Erwin; Sætre, Rune. (2016) IDI@NTNU at SemEval-2016 Task 6: Detecting Stance in Tweets Using Shallow Features and GloVe Vectors for Word Representation. Association for Computational Linguistics
    Academic chapter/article/Conference paper
  • Stav, Erlend; Floch, Jacqueline; Khan, Mohammad Ullah; Sætre, Rune. (2013) Using Meta-modelling for Construction of an End-User Development Framework. Springer
    Academic chapter/article/Conference paper
  • Kocbek, Simon; Sætre, Rune; Gregor, Stiglic; Kim, Jin-Dong; Pernek, Igor; Tsuruoka, Yoshimasa. (2011) Analysis of Gene Ranking Algorithms with Extraction of Relevant Biomedical Concepts from PubMed Publications. IEEE conference proceedings
    Academic chapter/article/Conference paper
  • Sætre, Rune; Khan, Mohammad Ullah; Herrmann, Peter Michael. (2011) End-user Composition of Web-based Services: The “Plus Alpha” Approach. Tapir Akademisk Forlag
    Other
  • Sætre, Rune; Ranang, Martin Thorsen; Steigedal, Tonje Strømmen; Stunes, Kamilla; Misund, Kristine; Thommesen, Liv. (2007) Webprot : online mining and annotation of biomedical literature using Google. Nova Science Publishers
    Academic chapter/article/Conference paper
  • Sætre, Rune; Tveit, Amund; Ranang, Martin Thorsen; Steigedal, Tonje Strømmen; Thommesen, Liv; Stunes, Kamilla. (2005) gProt: Annotating protein interactions using Google and Gene Ontology. Springer
    Academic chapter/article/Conference paper

Report

  • Krüger, Andreas; Setalid, Marius; Skari, Even Letting; Sætre, Rune. (2019) NOLAS Insights Systemizing operational characteristics in an organization consisting of several functional units. NTNU
    Masters thesis
  • Sætre, Rune; Amble, Tore. (2006) GeneTUC: Natural Language Understanding in Medical Text. Doktoravhandlinger ved NTNU (59)
    Doctoral dissertation

Product

  • Sætre, Rune; Gulla, Jon Atle. (2012) FastlegeVakten.
    Software

Teaching

Courses

  • TDT4102 - Prosedyre- og objektorientert programmering

Outreach

2024

  • Academic lecture
    Chen, Bowen; Sætre, Rune; Miyao, Yusuke. (2024) A Comprehensive Evaluation of Inductive Reasoning Capabilities and Problem Solving in Large Language Models. EACL - Association for Computational Linguistics Europe EACL 2024 , St. Julian's 2024-03-17 - 2024-03-22
  • Academic lecture
    Dev, Aamin; Asakura, Takuto; Sætre, Rune. (2024) An Approach to Co-reference Resolution and Formula Grounding for Mathematical Identifiers Using Large Language Models. LREC / CoLING 2024 MATHNLP 2024 , Torino 2024-05-21 - 2024-05-25

2021

  • Interview
    Steen Angell, Vilde Marie; Haugann, Håkon; Farshchian, Veronica; Sætre, Rune; Rye, Johan Fredrik; Reitan, Marit. (2021) Ujevn arbeidsmengde skaper frustrasjon blant studenter. Under Dusken, Nr 11, 107. årgang Under Dusken, Nr 11, 107. årgang [Journal] 2021-11-02

2018

  • Popular scientific lecture
    Sætre, Rune; Mcmillan, Michael David. (2018) "Minority Report – Behind the scenes". BRAIN NTNU BRAIN Talks , FRAM, Gløshaugen, Trondheim 2018-10-09 - 2018-10-09

2017

  • Poster
    Marsi, Erwin; Skidar, Utpal; Marco, Cristina; Barik, Biswanath; Sætre, Rune. (2017) NTNU-1@ScienceIE at SemEval-2017 Task 10: Identifying and Labelling Keyphrases with Conditional Random Fields. ACL 2017 SemEval 2017 , Vancouver 2017-08-03 - 2017-08-04

2016

  • Academic lecture
    Wang, Alf Inge; Zhu, Meng; Sætre, Rune. (2016) The Effect of Digitizing and Gamifying Quizzing in Classrooms. The University of the West of Scotland The 10th European Conference on Games Based Learning , Paisley, Scotland 2016-10-06 - 2016-10-07
  • Academic lecture
    Sætre, Rune; Nytrø, Øystein; Nordbø, Stein Jakob; Steinsbekk, Aslak. (2016) Visual Exploration and Cohort Identification of Acute Patient Histories Aggregated from Heterogeneous Sources. IEEE HDMM @ ICDE 2016 , Helsinki 2016-05-16 - 2016-05-16

2014

  • Lecture
    Sætre, Rune; Nytrø, Øystein. (2014) PAsTAs: Fra store helsedata til forståelig informasjon. NTNU Videre HelsIT 2014 , Trondheim 2014-10-14 - 2014-10-15

2013

  • Poster
    Berntsen, Gro Karine Rosvold; Nytrøe, Øystein; Sætre, Rune; Schrader, Per; Steinsbekk, Aslak. (2013) Giving patients a voice - Patient evaluation of PAtients TrAjectories – The PasTAs protocol. Clinical Practice Research Database Data Quality workshop , London 2013-09-06 - 2013-09-06

2012

  • Academic lecture
    Sætre, Rune; Nytrø, Øystein. (2012) HEXAnord2, Proposal for a pipeline for capturing, cleaning and reasoning about patient events. Danish Technical University, Department of Systems Biology Last HexaNord Meeting , Copenhagen 2012-09-12 - 2012-09-14
  • Interview
    Beltesbrekke, Ingvild Sættem; Sætre, Rune. (2012) Venteliste på Fastlegeordningen. P1: Her og Nå P1: Her og Nå [Radio] 2012-08-22
  • Academic lecture
    Sætre, Rune; Nytrø, Øystein. (2012) «Keeping patients out of hospital» Capturing care trajectories. Computer and Systems Sciences @ Stockholm University & KTH Clinical NLP Workshop 2012 , Stockholm 2012-06-20 - 2012-06-21

2011

  • Poster
    Sætre, Rune; Khan, Mohammad Ullah; Stav, Erlend; Fernandez, Alfredo Perez; Herrmann, Peter Michael; Gulla, Jon Atle. (2011) Towards Ontology-Driven Composition of Personalized Mobile Services by End-users. NLDB Natural Language Processing and Information Systems , Alicante 2011-06-28 - 2011-06-30
  • Poster
    Kocbek, Simon; Sætre, Rune; Gregor, Stiglic; Kim, Jin-Dong; Pernek, Igor; Tsuruoka, Yoshimasa. (2011) Analysis of Gene Ranking Algorithms with Extraction of Relevant Biomedical Concepts from PubMed Publications. IEEE IEEE International Conference on Computational Advances in Bio and medical Sciences (ICCABS) , Orlando, Florida 2011-02-03 - 2011-02-05
  • Academic lecture
    Floch, Jacqueline; Stav, Erlend; Khan, Mohammad Ullah; Herrmann, Peter Michael; Sanders, Richard; Sætre, Rune. (2011) End-User Service Composition in Mobile Pervasive Environments. End-User Development, EUD4Services Third International Symposium, IS-EUD 2011 , Torre Canne (BR) 2011-06-07 - 2011-06-07
  • Academic lecture
    Sætre, Rune; Khan, Mohammad Ullah; Herrmann, Peter Michael. (2011) End-user Composition of Web-based Services: The “Plus Alpha” Approach. Norwegian University of Science and technology India-Norway Workshop on Web Concepts and Technologies 2011 , Trondheim 2011-10-03 - 2011-10-03

2010

  • Academic lecture
    Miwa, Makoto; Miyao, Yusuke; Sætre, Rune; Tsujii, Jun'ichi. (2010) Entity-Focused Sentence Simplification for Relation Extraction. COLING 23rd International Conference on Computational Linguistics , Beijing 2010-08-23 - 2010-08-27
  • Academic lecture
    Okazaki, Naoaki; Cho, Han-Cheol; Sætre, Rune; Pyysalo, Sampo; Ohta, Tomoko; Tsujii, Jun'ichi. (2010) The gene normalization and interactive systems of the University of Tokyo in the BioCreative III challenge. NLM BioCreative III , Bethesda, Maryland 2010-09-13 - 2010-09-15

2009

  • Academic lecture
    Sætre, Rune; Yoshida, Kazuhiro; Miwa, Makoto; Matsuzaki, Takuya; Kano, Yoshinobu; Tsujii, Jun'ichi. (2009) AkaneRE Relation Extraction: Protein Interaction and Normalization in the BioCreAtIvE II.5 Challenge. CNIO BioCreative II.5 , Madrid 2009-10-07 - 2009-10-09
  • Poster
    Sætre, Rune; Miwa, Makoto; Yoshida, Kazuhiro; Tsujii, Jun'ichi. (2009) From Protein-Protein Interaction to Molecular Event Extraction. ACL Proceedings of Natural Language Processing in Biomedicine , Boulder, Colorado 2009-06-04 - 2009-06-05

2008

  • Poster
    Sætre, Rune; Kemper, Brian; Oda, Kanae; Okazaki, Naoaki; Matsuoka, Yukiko; Kikuchi, Norihiro. (2008) PathText: Text Mining Tools Integrated with Biological Pathway. G2S Genomes to Systems Conference 2008 Handbook , Manchester 2008-03-17 - 2008-03-19
  • Poster
    Sætre, Rune; Kemper, Brian; Oda, Kanae; Okazaki, Naoaki; Matsuoka, Yukiko; Kikuchi, Norihiro. (2008) Connecting Text Mining and Pathways using the PathText Resource. LREC Language Resources and Evaluation Conference , Marrakech 2008-05-26 - 2008-06-01
  • Poster
    Sætre, Rune; Kemper, Brian; Oda, Kanae; Matsuoka, Yukiko; Kikuchi, Norihiro; Kitano, Hiroaki. (2008) PathText/payao development: Text/pathway annotations. ICSB, Gothenburg University 9th International Conference on Systems Biology , Gothenburg 2008-08-22 - 2008-08-28

2007

  • Academic lecture
    Sætre, Rune; Yoshida, Kazuhiro; Yakushiji, Akane; Miyao, Yusuke; Matsubayashi, Yuichiro; Ohta, Tomoko. (2007) AKANE System: Protein-Protein Interaction Pairs in BioCreAtIvE2 Challenge, PPI-IPS subtask. CNIO Second BioCreative Challenge Evaluation Workshop , Madrid 2007-04-23 - 2007-04-25
  • Academic lecture
    Yan Hua, Chen; Ramampiaro, Heri; Lægreid, Astrid; Sætre, Rune. (2007) ProtIR prototype: abstract relevance for Protein-Protein Interaction in BioCreAtIvE2 Challenge, PPI-IAS subtask. CNIO BioCreAtIvE II , Madrid 2007-04-23 - 2007-04-25
  • Academic lecture
    Sætre, Rune; Sagae, Kenji; Tsujii, Jun'ichi. (2007) Syntactic features for protein-protein interaction extraction. LBM 2nd International Symposium on Languages in Biology and Medicine , Singapore 2007-12-06 - 2007-12-07

2006

  • Interview
    Sætre, Rune. (2006) Mitt Funn: Leseautomat. Om Doktorgradsarbeidet. A-magasinet, fredagstillegg til Aftenposten A-magasinet, fredagstillegg til Aftenposten [Newspaper] 2006-07-14

2005

  • Academic lecture
    Sætre, Rune; Tveit, Amund; Strømmen, Tonje; Lægreid, Astrid. (2005) Semantic Annotation of Biomedical Literature Using Google. The Institute of High Performance Computing (IHPC) Data Mining and Bioinformatics Workshop (DMBIO 2005, In conjunction with ICCSA 2005) , Singapore 2005-05-09 - 2005-05-12
  • Academic lecture
    Tveit, Amund; Sætre, Rune; Strømmen, Tonje; Lægreid, Astrid. (2005) ProtChew: Automatic Extraction of Protein Names from Biomedical Literature. IEEE, Shunsuke UEMURA (NAIST) International Workshop on Biomedical Data Engineering (BMDE 2005, In conjunction with ICDE 2005) , Tokyo 2005-04-03 - 2005-04-04
  • Popular scientific lecture
    Sætre, Rune; Tveit, Amund; Ranang, Martin Thorsen; Strømmen, Tonje; Thommesen, Liv; Stunes, Astrid Kamilla. (2005) gProt: Annotating Protein Interactions Using Google and Gene Ontology. Rajiv Khosla, Robert J. Howlett, Lakhmi C. Jain Knowledge-Based Intelligent Information and Engineering Systems: 9th International Conference, KES 2005 , Melbourne 2005-09-14 - 2005-09-16

1997

  • Academic lecture
    Sandstå, Olav; Andersen, Thomas Maukon; Midtstraum, Roger; Sætre, Rune. (1997) Access time modeling of a MLR1 tape drive. Norsk informatikkonferanse , Voss

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