Stefanie Muff
About
Publications
2024
-
Nafstad, Ådne Messel;
Jensen, Henrik;
Rønning, Bernt;
Muff, Stefanie;
Stawski, Clare;
Räsänen, Katja.
(2024)
Ecological & evolutionary role of resting metabolic rate in wild house sparrow populations.
Norges teknisk-naturvitenskapelige universitet
Norges teknisk-naturvitenskapelige universitet
Doctoral dissertation
-
Saatoglu, Fikriye Dilan;
Lundregan, Sarah;
Fetterplace, Evelyn;
Goedert, Debora;
Husby, Arild;
Niskanen, Alina Katariina.
(2024)
The genetic basis of dispersal in a vertebrate metapopulation.
Molecular Ecology
Academic article
-
Singsaas, Øyvind;
Muff, Stefanie.
(2024)
Neural networks for genomic prediction in the wild.
Norges teknisk-naturvitenskapelige universitet
Norges teknisk-naturvitenskapelige universitet
Masters thesis
-
Skarstein, Emma Sofie;
Bastos, Leonardo Soares;
Rue, Håvard;
Muff, Stefanie.
(2024)
Bayesian models for missing and misclassified variables using integrated nested Laplace approximations.
arXiv.org
Academic article
-
Skarstein, Emma Sofie;
Muff, Stefanie.
(2024)
inlamemi: An R package for missing data imputation and measurement error modelling using INLA.
arXiv.org
Academic article
-
Aspheim, Janne Cathrin Hetle;
Aase, Kenneth;
Bolstad, Geir Hysing;
Jensen, Henrik;
Muff, Stefanie.
(2024)
Bayesian marker-based principal component ridge regression – a flexible multipurpose framework for quantitative genetics in wild study systems.
BioRxiv
Academic article
2023
-
Arce Guillen, Rafael;
Lindgren, Finn Kristian;
Muff, Stefanie;
Glass, Thomas W.;
Breed, Greg A.;
Schlägel, Ulrike E..
(2023)
Accounting for unobserved spatial variation in step selection analyses of animal movement via spatial random effects.
Methods in Ecology and Evolution
Academic article
-
Nafstad, Ådne Messel;
Rønning, Bernt;
Aase, Kenneth;
Ringsby, Thor Harald;
Hagen, Ingerid Julie;
Ranke, Peter Sjolte.
(2023)
Spatial variation in the evolutionary potential and constraints of basal metabolic rate and body mass in a wild bird.
Journal of Evolutionary Biology
Academic article
-
Skarstein, Emma Sofie;
Martino, Sara;
Muff, Stefanie.
(2023)
A joint Bayesian framework for missing data and measurement
error using integrated nested Laplace approximations.
Biometrical Journal
Academic article
2022
-
Egli, Mathias;
Deforth, Manja;
Keiser, Stefanie;
Meyenberger, Patrick;
Muff, Stefanie;
Witt, Claudia M..
(2022)
Effectiveness of hypnosis in third molar extraction: A randomized controlled trial (HypMol).
Journal of Pain
Academic article
-
Muff, Stefanie;
Nilsen, Erlend Birkeland;
O'Hara, Robert B.;
Nater, Chloe Rebecca.
(2022)
Response to ‘Why P-values are not measures of evidence’ by D. Lakens.
Trends in Ecology & Evolution
Reader opinion piece
-
Muff, Stefanie;
Nilsen, Erlend Birkeland;
Nater, Chloe Rebecca;
O'Hara, Robert B..
(2022)
Joint reply to 'Rewriting results in the language of compatibility' by V. Amrhein and S. Greenland, and to 'The evidence contained in the P-value is context-dependent' by F. Hartig and F. Barraquand.
Trends in Ecology & Evolution
Reader opinion piece
-
Aase, Kenneth;
Jensen, Henrik;
Muff, Stefanie.
(2022)
Genomic estimation of quantitative genetic parameters in wild admixed populations.
Methods in Ecology and Evolution
Academic article
2021
-
Muff, Stefanie;
Nilsen, Erlend Birkeland;
OHara, Robert Brian;
Nater, Chloe Rebecca.
(2021)
Rewriting results sections in the language of evidence.
Trends in Ecology & Evolution
Academic literature review
-
Aase, Kenneth;
Muff, Stefanie.
(2021)
Genetic Group Animal Models in the Genomics Era.
Norges teknisk-naturvitenskapelige universitet
Norges teknisk-naturvitenskapelige universitet
Masters thesis
-
Barth, Jürgen;
Muff, Stefanie;
Kern, Alexandra;
Zieger, Anja;
Keiser, Stefanie;
Zoller, Marco.
(2021)
Effect of Briefing on Acupuncture Treatment Outcome Expectations, Pain, and Adverse Side Effects among Patients with Chronic Low Back Pain: A Randomized Clinical Trial.
JAMA Network Open
Academic article
-
Reid, Jane Margaret;
Arcese, Peter;
Nietlisbach, Pirmin;
Wolak, Matthew;
Muff, Stefanie;
Dickel, Lisa.
(2021)
Immigration counter-acts local micro-evolution of a major fitness component: migration-selection balance in free-living song sparrows.
Evolution Letters
Academic article
2020
-
Lundregan, Sarah L.;
Niskanen, Alina K.;
Muff, Stefanie;
Holand, Håkon;
Kvalnes, Thomas;
Ringsby, Thor-Harald.
(2020)
Resistance to gapeworm parasite has both additive and dominant genetic components in house sparrows, with evolutionary consequences for ability to respond to parasite challenge.
Molecular Ecology
Academic article
-
Niskanen, Alina Katariina;
Billing, Anna Maria;
Holand, Håkon;
Hagen, Ingerid Julie;
Araya-Ajoy, Yimen;
Husby, Arild.
(2020)
Consistent scaling of inbreeding depression in space and time in a house sparrow metapopulation.
Proceedings of the National Academy of Sciences of the United States of America (PNAS)
Academic article
2019
-
Weinberger, Irene;
Muff, Stefanie;
Kranz, Andreas;
Bontadina, Fabio.
(2019)
Riparian vegetation provides crucial shelter for resting otters in a human-dominated landscape.
Mammalian Biology
Academic article
-
Ponzi, Erica;
Keller, Lukas F.;
Muff, Stefanie.
(2019)
The simulation extrapolation technique meets ecology and evolution: A general and intuitive method to account for measurement error.
Methods in Ecology and Evolution
Academic article
-
Nietlisbach, Pirmin;
Muff, Stefanie;
Reid, Jane Margaret;
Whitlock, Michael;
Keller, Lukas F..
(2019)
Nonequivalent lethal equivalents: Models and inbreeding metrics for unbiased estimation of inbreeding load.
Evolutionary Applications
Academic article
-
Muff, Stefanie;
Niskanen, Alina Katariina;
Saatoglu, Dilan;
Keller, Lukas;
Jensen, Henrik.
(2019)
Animal models with group-specific additive genetic variances: extending genetic group models.
Genetics Selection Evolution
Academic article
-
Muff, Stefanie.
(2019)
Book review for "Bayesian Regression Modeling with INLA" by Xiaofeng Wang, Yu Ryan Yue, and Julian J. Faraway.
Journal of the American Statistical Association
Book review
-
Nietlisbach, Pirmin;
Muff, Stefanie;
Reid, Jane M.;
Whitlock, Michael;
Keller, Lukas F..
(2019)
Nonequivalent lethal equivalents: Models and inbreeding metrics for unbiased estimation of inbreeding load.
Evolutionary Applications
Academic article
-
Bächinger, D.;
Brühlmann, C.;
Honegger, T.;
Michalopoulou, E.;
Naldi, A. Monge;
Wettstein, V.G..
(2019)
Endotype-Phenotype Patterns in Meniere’s Disease Based on Gadolinium-Enhanced MRI of the Vestibular Aqueduct.
Frontiers in Neurology
Academic article
-
Muff, Stefanie;
Signer, Johannes;
Fieberg, John.
(2019)
Accounting for individual‐specific variation in habitat‐selection studies: Efficient estimation of mixed‐effects models using Bayesian or frequentist computation.
Journal of Animal Ecology
Academic article
-
Bozzuto, Claudio;
Biebach, Iris;
Muff, Stefanie;
Ives, Anothony R.;
Keller, Lukas F..
(2019)
Inbreeding reduces long-term growth of Alpine ibex populations.
Nature Ecology and Evolution
Academic article
2018
-
Muff, Stefanie;
Puhan, Milo A.;
Held, Leonhard.
(2018)
Bias away from the Null due to miscounted outcomes? A case study on the TORCH trial.
Statistical Methods in Medical Research
Academic article
-
Ponzi, Erica;
Keller, Lukas F.;
Bonnet, Timothee;
Muff, Stefanie.
(2018)
eritability, selection, and the response to selection in the presence of phenotypic measurement error: effects, cures, and the role of repeated measurements.
Evolution
Academic article
Journal publications
-
Saatoglu, Fikriye Dilan;
Lundregan, Sarah;
Fetterplace, Evelyn;
Goedert, Debora;
Husby, Arild;
Niskanen, Alina Katariina.
(2024)
The genetic basis of dispersal in a vertebrate metapopulation.
Molecular Ecology
Academic article
-
Skarstein, Emma Sofie;
Bastos, Leonardo Soares;
Rue, Håvard;
Muff, Stefanie.
(2024)
Bayesian models for missing and misclassified variables using integrated nested Laplace approximations.
arXiv.org
Academic article
-
Skarstein, Emma Sofie;
Muff, Stefanie.
(2024)
inlamemi: An R package for missing data imputation and measurement error modelling using INLA.
arXiv.org
Academic article
-
Aspheim, Janne Cathrin Hetle;
Aase, Kenneth;
Bolstad, Geir Hysing;
Jensen, Henrik;
Muff, Stefanie.
(2024)
Bayesian marker-based principal component ridge regression – a flexible multipurpose framework for quantitative genetics in wild study systems.
BioRxiv
Academic article
-
Arce Guillen, Rafael;
Lindgren, Finn Kristian;
Muff, Stefanie;
Glass, Thomas W.;
Breed, Greg A.;
Schlägel, Ulrike E..
(2023)
Accounting for unobserved spatial variation in step selection analyses of animal movement via spatial random effects.
Methods in Ecology and Evolution
Academic article
-
Nafstad, Ådne Messel;
Rønning, Bernt;
Aase, Kenneth;
Ringsby, Thor Harald;
Hagen, Ingerid Julie;
Ranke, Peter Sjolte.
(2023)
Spatial variation in the evolutionary potential and constraints of basal metabolic rate and body mass in a wild bird.
Journal of Evolutionary Biology
Academic article
-
Skarstein, Emma Sofie;
Martino, Sara;
Muff, Stefanie.
(2023)
A joint Bayesian framework for missing data and measurement
error using integrated nested Laplace approximations.
Biometrical Journal
Academic article
-
Egli, Mathias;
Deforth, Manja;
Keiser, Stefanie;
Meyenberger, Patrick;
Muff, Stefanie;
Witt, Claudia M..
(2022)
Effectiveness of hypnosis in third molar extraction: A randomized controlled trial (HypMol).
Journal of Pain
Academic article
-
Muff, Stefanie;
Nilsen, Erlend Birkeland;
O'Hara, Robert B.;
Nater, Chloe Rebecca.
(2022)
Response to ‘Why P-values are not measures of evidence’ by D. Lakens.
Trends in Ecology & Evolution
Reader opinion piece
-
Muff, Stefanie;
Nilsen, Erlend Birkeland;
Nater, Chloe Rebecca;
O'Hara, Robert B..
(2022)
Joint reply to 'Rewriting results in the language of compatibility' by V. Amrhein and S. Greenland, and to 'The evidence contained in the P-value is context-dependent' by F. Hartig and F. Barraquand.
Trends in Ecology & Evolution
Reader opinion piece
-
Aase, Kenneth;
Jensen, Henrik;
Muff, Stefanie.
(2022)
Genomic estimation of quantitative genetic parameters in wild admixed populations.
Methods in Ecology and Evolution
Academic article
-
Muff, Stefanie;
Nilsen, Erlend Birkeland;
OHara, Robert Brian;
Nater, Chloe Rebecca.
(2021)
Rewriting results sections in the language of evidence.
Trends in Ecology & Evolution
Academic literature review
-
Barth, Jürgen;
Muff, Stefanie;
Kern, Alexandra;
Zieger, Anja;
Keiser, Stefanie;
Zoller, Marco.
(2021)
Effect of Briefing on Acupuncture Treatment Outcome Expectations, Pain, and Adverse Side Effects among Patients with Chronic Low Back Pain: A Randomized Clinical Trial.
JAMA Network Open
Academic article
-
Reid, Jane Margaret;
Arcese, Peter;
Nietlisbach, Pirmin;
Wolak, Matthew;
Muff, Stefanie;
Dickel, Lisa.
(2021)
Immigration counter-acts local micro-evolution of a major fitness component: migration-selection balance in free-living song sparrows.
Evolution Letters
Academic article
-
Lundregan, Sarah L.;
Niskanen, Alina K.;
Muff, Stefanie;
Holand, Håkon;
Kvalnes, Thomas;
Ringsby, Thor-Harald.
(2020)
Resistance to gapeworm parasite has both additive and dominant genetic components in house sparrows, with evolutionary consequences for ability to respond to parasite challenge.
Molecular Ecology
Academic article
-
Niskanen, Alina Katariina;
Billing, Anna Maria;
Holand, Håkon;
Hagen, Ingerid Julie;
Araya-Ajoy, Yimen;
Husby, Arild.
(2020)
Consistent scaling of inbreeding depression in space and time in a house sparrow metapopulation.
Proceedings of the National Academy of Sciences of the United States of America (PNAS)
Academic article
-
Weinberger, Irene;
Muff, Stefanie;
Kranz, Andreas;
Bontadina, Fabio.
(2019)
Riparian vegetation provides crucial shelter for resting otters in a human-dominated landscape.
Mammalian Biology
Academic article
-
Ponzi, Erica;
Keller, Lukas F.;
Muff, Stefanie.
(2019)
The simulation extrapolation technique meets ecology and evolution: A general and intuitive method to account for measurement error.
Methods in Ecology and Evolution
Academic article
-
Nietlisbach, Pirmin;
Muff, Stefanie;
Reid, Jane Margaret;
Whitlock, Michael;
Keller, Lukas F..
(2019)
Nonequivalent lethal equivalents: Models and inbreeding metrics for unbiased estimation of inbreeding load.
Evolutionary Applications
Academic article
-
Muff, Stefanie;
Niskanen, Alina Katariina;
Saatoglu, Dilan;
Keller, Lukas;
Jensen, Henrik.
(2019)
Animal models with group-specific additive genetic variances: extending genetic group models.
Genetics Selection Evolution
Academic article
-
Muff, Stefanie.
(2019)
Book review for "Bayesian Regression Modeling with INLA" by Xiaofeng Wang, Yu Ryan Yue, and Julian J. Faraway.
Journal of the American Statistical Association
Book review
-
Nietlisbach, Pirmin;
Muff, Stefanie;
Reid, Jane M.;
Whitlock, Michael;
Keller, Lukas F..
(2019)
Nonequivalent lethal equivalents: Models and inbreeding metrics for unbiased estimation of inbreeding load.
Evolutionary Applications
Academic article
-
Bächinger, D.;
Brühlmann, C.;
Honegger, T.;
Michalopoulou, E.;
Naldi, A. Monge;
Wettstein, V.G..
(2019)
Endotype-Phenotype Patterns in Meniere’s Disease Based on Gadolinium-Enhanced MRI of the Vestibular Aqueduct.
Frontiers in Neurology
Academic article
-
Muff, Stefanie;
Signer, Johannes;
Fieberg, John.
(2019)
Accounting for individual‐specific variation in habitat‐selection studies: Efficient estimation of mixed‐effects models using Bayesian or frequentist computation.
Journal of Animal Ecology
Academic article
-
Bozzuto, Claudio;
Biebach, Iris;
Muff, Stefanie;
Ives, Anothony R.;
Keller, Lukas F..
(2019)
Inbreeding reduces long-term growth of Alpine ibex populations.
Nature Ecology and Evolution
Academic article
-
Muff, Stefanie;
Puhan, Milo A.;
Held, Leonhard.
(2018)
Bias away from the Null due to miscounted outcomes? A case study on the TORCH trial.
Statistical Methods in Medical Research
Academic article
-
Ponzi, Erica;
Keller, Lukas F.;
Bonnet, Timothee;
Muff, Stefanie.
(2018)
eritability, selection, and the response to selection in the presence of phenotypic measurement error: effects, cures, and the role of repeated measurements.
Evolution
Academic article
Report
-
Nafstad, Ådne Messel;
Jensen, Henrik;
Rønning, Bernt;
Muff, Stefanie;
Stawski, Clare;
Räsänen, Katja.
(2024)
Ecological & evolutionary role of resting metabolic rate in wild house sparrow populations.
Norges teknisk-naturvitenskapelige universitet
Norges teknisk-naturvitenskapelige universitet
Doctoral dissertation
-
Singsaas, Øyvind;
Muff, Stefanie.
(2024)
Neural networks for genomic prediction in the wild.
Norges teknisk-naturvitenskapelige universitet
Norges teknisk-naturvitenskapelige universitet
Masters thesis
-
Aase, Kenneth;
Muff, Stefanie.
(2021)
Genetic Group Animal Models in the Genomics Era.
Norges teknisk-naturvitenskapelige universitet
Norges teknisk-naturvitenskapelige universitet
Masters thesis
Teaching
Courses
Outreach
2024
-
PosterAase, Kenneth; Burnett, Hamish Andrew; Jensen, Henrik; Muff, Stefanie. (2024) How accurate is genomic prediction across wild populations?. 7th International Conference of Quantitative Genetics , Wien 2024-07-22 - 2024-07-26
2023
-
Academic lectureGoedert, Debora; Saatoglu, Fikriye Dilan; Burnett, Hamish Andrew; Muff, Stefanie; Frank, tor Hansson; Araya-Ajoy, Yimen G.. (2023) Genetic architecture of sex-biased dispersal. WAMBAM 2023-09-04 - 2023-09-08
-
Academic lectureRechsteiner, Aud Helen Halbritter; Grainger, Matthew; Telford, Richard James; Kusch, Erik; Nilsen, Erlend Birkeland; Andrew, Carrie. (2023) Living Norway Course on Open, Reproducible and Transparent Science in Ecology. Living Norway Course on Open, Reproducible and Transparent Science in Ecology , Hjerkinn 2023-11-13 - 2023-11-17
-
Academic lectureGoedert, Debora; Burnett, Hamish Andrew; Saatoglu, Fikriye Dilan; Frank, tor Hansson; Araya-Ajoy, Yimen G.; Muff, Stefanie. (2023) Underlying causes and eco-evolutionary consequences of dispersal. Squid Workshop - Brazil , Santuario Caracas 2023-11-23 - 2023-11-27
-
LectureGuillen, Rafael Arce; Lindgren, Finn; Muff, Stefanie; Glass, Thomas W.; Breed, Greg; Schlaegel, Ulrike. (2023) Accounting for unobserved spatial variation in step selection analyses of animal movement via spatial random effects. 16th International conference of the ERCIM WG on Computational and Methodological Statistics (CMStatistics 2023) , Berlin 2023-12-16 - 2023-12-18
-
Academic lectureAase, Kenneth; Jensen, Henrik; Muff, Stefanie. (2023) How accurate is genomic prediction?. 2023 Wild Animal Models Biennial Meeting , Okehampton 2023-09-04 - 2023-09-08
2022
-
LectureRechsteiner, Aud Helen Halbritter; Endresen, Dag; Nilsen, Erlend Birkeland; Chipperfield, Joseph; Grainger, Matthew; Telford, Richard James. (2022) Open, Reproducible, and Transparent Science in Ecology. Open, Reproducible, and Transparent Science in Ecology , Finse 2022-11-14 - 2022-11-18
-
PosterSkarstein, Emma Sofie; Martino, Sara; Muff, Stefanie. (2022) We show how to handle missing data in INLA by generalizing exising measurement error models. ISBA World Meeting 2022 , Montreal 2022-06-26 - 2022-07-01
-
PosterGhimire, Kiran; Burnett, Hamish Andrew; Goedert, Debora; Ranke, Peter Sjolte; Muff, Stefanie; Ringsby, Thor Harald. (2022) Effects of inbreeding on nestling fitness in an insular house sparrow metapopulation in northern Norway. 5th Conference of Nordic Society OIKOS 2022 , Aarhus 2022-06-07 - 2022-06-10
-
Academic lectureMuff, Stefanie. (2022) Efficient mixed-effects modeling in habitat selection studies. The Wildlife Society Annual Conference 2022-11-06 - 2022-11-10
-
LectureMuff, Stefanie. (2022) Methods for modeling data from multiple individuals - Implementation of SSFs in INLA and glmmTMB. International Statistical Ecology Conference , Cape Town 2022-06-26 -
2021
-
PosterSiren, Jenni; Niskanen, Alina Katariina; Muff, Stefanie; Jensen, Henrik. (2021) Interactions of environment and inbreeding in house sparrows (Passer domesticus). 4th Symposium for Molecular Ecology and Evolution in Finland , Oulu 2021-10-05 - 2021-10-07
-
PosterAspheim, Janne Cathrin Hetle; Jensen, Henrik; Reid, Jane Margaret; Bolstad, Geir Hysing; OHara, Robert Brian; Kvalnes, Thomas. (2021) Marker-based estimation of additive genetic variance using dimension-reduction techniques - methods from animal breeding adapted to wild study systems using a Bayesian framework. he 28th Nordic Conference in Mathematical Statistics , Tromsø 2021-06-21 - 2021-06-24
-
PosterSkarstein, Emma Sofie; Muff, Stefanie. (2021) A Joint Bayesian Framework for Measurement Error and Missing Data. NORDSTAT , Tromsø 2021-06-21 - 2021-06-24
2020
-
Academic lectureMuff, Stefanie. (2020) Statistical methods in quantitative genetics. Genetic group models and marker-based regression. Talk at Centre for Advanced Study (CAS) , Oslo 2020-03-17 - 2020-03-17
2019
-
Academic lectureNiskanen, Alina Katariina; Billing, Anna Maria; Holand, Håkon; Hagen, Ingerid Julie; Huisman, Jisca; Araya-Ajoy, Yimen. (2019) Inbreeding depression in a house sparrow metapopulation. Molecular Ecology and Evolution Lab meeting , Oulu 2019-01-24 - 2019-01-24
-
PosterLundregan, Sarah; Muff, Stefanie; Kvalnes, Thomas; Niskanen, Alina Katariina; Holand, Håkon; Husby, Arild. (2019) Susceptibility to gapeworm parasite has both additive and dominant genetic components in house sparrows. 2019 Congress of the European Society for Evolutionary Biology (ESEB) , Turku 2019-08-19 - 2019-08-24