Journal publications

• Hose, David Rodney; Lawford, Patricia V.; Huberts, Wouter; Hellevik, Leif Rune; Omholt, Stig William; van de Vosse, Frans. (2019) Cardiovascular models for personalised medicine: Where now and where next?. Medical Engineering and Physics. vol. 72.
• Holter, Karl Erik; Kehlet, Benjamin Dam; Devor, Anna; Sejnowski, Terrence J.; Dale, Anders M.; Omholt, Stig William; Ottersen, Ole Petter; Nagelhus, Erlend Arnulf; Mardal, Kent-Andre; Pettersen, Klas. (2017) Interstitial solute transport in 3D reconstructed neuropil occurs by diffusion rather than bulk flow. Proceedings of the National Academy of Sciences of the United States of America. vol. 114 (37).
• Macqueen, Daniel J.; Primmer, Craig R.; Houston, Ross D.; Nowak, Barbara F.; Bernatchez, Louis; Bergseth, Steinar; Davidson, William S.; Gallardo-Escárate, Cristian; Goldammer, Tom; Guiguen, Yann; Iturra, Patricia; Kijas, James W.; Koop, Ben F.; Lien, Sigbjørn; Maass, Alejandro; Martin, Samuel A. M.; McGinnity, Philip; Montecino, Martin; Naish, Kerry; Nichols, Krista M.; Ólafsson, Kristinn; Omholt, Stig William; Palti, Yniv; Plastow, Graham S.; Rexroad, Caird E. 3rd; Rise, Matthew L.; Ritchie, Rachael J.; Sandve, Simen Rød; Schulte, Patricia M.; Tello, Alfredo; Vidal, Rodrigo; Vik, Jon Olav; Wargelius, Anna; Yáñez, José Manuel. (2017) Functional Annotation of All Salmonid Genomes (FAASG): an international initiative supporting future salmonid research, conservation and aquaculture. BMC Genomics. vol. 18 (484).
• Gjuvsland, Arne Bjørke; Zörgö, Enikö Beatrix; Antony Samy, Jeevan Karloss; Stenberg, Simon; Demirsoy, Ibrahim H; Roque, Francisco; Maciaszczyk-Dziubinska, Ewa; Migocka, Magdalena; Alonso-Perez, Elisa; Zackrisson, Martin; Wysocki, Robert; Tamas, Markus J; Jonassen, Inge; Omholt, Stig William; Warringer, Jonas. (2016) Disentangling genetic and epigenetic determinants of ultrafast adaptation. Molecular Systems Biology. vol. 12 (12).
• Kahn, Uniza Wahid; Øverli, Øyvind; Hinkle, Patricia M.; Pasha, Farhan Ahmad; Johansen, Ida Beitnes; Berget, Ingunn; Silva, Patricia I. M.; Kittilsen, Silje; Höglund, Erik; Omholt, Stig W; Våge, Dag Inge. (2016) A novel role for pigment genes in the stress response in rainbow trout (Oncorhynchus mykiss). Scientific Reports. vol. 6.
• Lien, Sigbjørn; Koop, Ben F; Sandve, Simen Rød; Miller, Jason R.; Kent, Matthew Peter; Nome, Torfinn; Hvidsten, Torgeir Rhoden; Leong, Jong; Minkley, David R.; Zimin, Aleksey; Grammes, Fabian; Grove, Harald; Gjuvsland, Arne Bjørke; Walenz, Brian; Hermansen, Russell A.; von Schalburg, Kristian R.; Rondeau, Eric; Genova, Alex Di; Antony Samy, Jeevan Karloss; Vik, Jon Olav; Vigeland, Magnus Dehli; Caler, Lis; Grimholt, Unni; Jentoft, Sissel; Våge, Dag Inge; de Jong, Pieter J.; Moen, Thomas; Baranski, Matthew; Palti, Yniv; Smith, Douglas W.; Yorke, James A.; Nederbragt, Alexander J.; Tooming-Klunderud, Ave; Jakobsen, Kjetill Sigurd; Jiang, Xuanting; Fan, Dingding; Hu, Yan; Liberles, David A.; Vidal, Rodrigo; Iturra, Patricia; Jones, Steven J.M.; Jonassen, Inge; Maass, Alejandro; Omholt, Stig William; Davidson, William S. (2016) The Atlantic salmon genome provides insights into rediploidization. Nature. vol. 533 (7602).
• Omholt, Stig William; Hunter, Peter J.. (2016) The human physiome: A necessary key for the creative destruction of medicine. Interface Focus. vol. 6 (2).
• Safaei, Soroush; Bradley, Christopher P; Suresh, Vinod; Mithraratne, Kumar; Muller, Alexandre; Ho, Harvey; Ladd, David; Hellevik, Leif Rune; Omholt, Stig William; Chase, J Geoffrey; Müller, Lucas O; Watanabe, Sansuke M; Blanco, Pablo J; de Bono, Bernard; Hunter, Peter J.. (2016) Roadmap for cardiovascular circulation model. Journal of Physiology. vol. 594 (23).
• Soroush, Safaei; Bradley, Christopher P; Suresh, Vinod; Mithraratne, Kumar; Muller, Alexandre; Ho, Harvey; Ladd, David; Hellevik, Leif Rune; Omholt, Stig William; Chase, J Geoffrey; Muller, Lucas Omar; Watanabe, Sansuke M; Blanco, Pablo J; Bono, Bernard; Hunter, Peter J.. (2016) Roadmap for cardiovascular circulation model. Journal of Physiology.
• Zackrisson, Martin; Hallin, Johan; Ottoson, Lars-Göran; Dahl, Peter; Fernandez-Parada, Esteban; Landström, Erik; Fernandez-Ricaud, Luciano; Kaferle, Petra; Skyman, Andreas; Stenberg, Simon; Omholt, Stig William; Petrovic, Uros; Warringer, Jonas; Blomberg, Anders. (2016) Scan-o-matic: High-Resolution Microbial Phenomics at a Massive Scale. G3: Genes, Genomes, Genetics. vol. 6 (9).
• Ibstedt, Sebastian; Stenberg, Simon; Bages, Sara; Gjuvsland, Arne Bjørke; Salinas, Francisco; Kourtchenko, Olga; Samy, Jeevan K.A.; Blomberg, Anders; Omholt, Stig William; Liti, Gianni; Beltran, Gemma; Warringer, Jonas. (2015) Concerted Evolution of Life Stage Performances Signals Recent Selection on Yeast Nitrogen Use. Molecular biology and evolution. vol. 32 (1).
• Kohler, Achim; Böcker, Ulrike; Shapaval, Volha; Forsmark, Annabelle; Andersson, Mats; Warringer, Jonas; Martens, Harald; Omholt, Stig William; Blomberg, Anders. (2015) High-Throughput Biochemical Fingerprinting of Saccharomyces cerevisiae by Fourier Transform Infrared Spectroscopy. PLOS ONE. vol. 10 (2).
• Nordbø, Øyvind; Gjuvsland, Arne Bjørke; Nermoen, Anders; Land, Sander; Niederer, Steven; Lamata, Pablo; Lee, Jack; Smith, Nicolas P.; Omholt, Stig William; Vik, Jon Olav. (2015) Towards causally cohesive genotype-phenotype modelling for characterization of the soft-tissue mechanics of the heart in normal and pathological geometries. Journal of the Royal Society Interface. vol. 12 (106).
• Voit, Eberhard; Martens, Harald; Omholt, Stig William. (2015) 150 Years of the Mass Action Law. PLoS Computational Biology. vol. 11 (1).
• Helgeland, Hanna; Sandve, Simen Rød; Torgersen, Jacob; Halle, Mari Kyllesø; Sundvold, Hilde; Omholt, Stig William; Våge, Dag Inge. (2014) The evolution and functional divergence of the beta-carotene oxygenase gene family in teleost fish-Exemplified by Atlantic salmon. Gene. vol. 543 (2).
• Nordbø, Øyvind; Lamata, P.; Land, Sander; Niederer, Steven A.; Aronsen, Jan Magnus; Louch, William Edward; Sjaastad, Ivar; Martens, Harald; Gjuvsland, Arne Bjørke; Tøndel, Kristin; Torp, Hans; Lohezic, M; Schneider, Jürgen; Remme, Espen W.; Smith, Nicolas P; Omholt, Stig W; Vik, Jon Olav. (2014) A computational pipeline for quantification of mouse myocardial stiffness parameters. Computers in Biology and Medicine. vol. 53.
• Pettersen, Klas; Bugenhagen, Scott M.; Nauman, Javaid; Beard, Daniel A.; Omholt, Stig W. (2014) Arterial Stiffening Provides Sufficient Explanation for Primary Hypertension. PLoS Computational Biology. vol. 10 (5).
• Flatt, Thomas; Amdam, Gro Vang; Kirkwood, Thomas B.L.; Omholt, Stig W. (2013) Life-history evolution and the polyphenic regulation of somatic maintenance and survival. The Quarterly review of biology. vol. 88 (3).
• Gjuvsland, Arne Bjørke; Vik, Jon Olav; Beard, Dan; Hunter, Peter J.; Omholt, Stig W. (2013) Bridging the genotypephenotype gap: what does it take?. Journal of Physiology. vol. 591 (8).
• Gjuvsland, Arne Bjørke; Wang, Yunpeng; Plahte, Erik; Omholt, Stig W. (2013) Monotonicity is a key feature of genotype-phenotype maps. Frontiers in Genetics. vol. 4.