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Ingrid Bakke

Ingrid Bakke

Professor
Department of Biotechnology and Food Science
Faculty of Medicine and Health Sciences

ingrid.bakke@ntnu.no
+4773412276 +4793247872 Kjemi 3, 131, Gløshaugen, Sem Sælands vei 8
About Publications Teaching Media

About

Associate professor in environmental biotechnology.

Research interests:

  • Interactions between fish and microbes
  • Microbial management in aquaculture systems, with a particular focus on RAS
  • Applied environmental microbiology and biological water treatment

Projects:

  • IPAMA: International partnership for advancing microbiome – informed aquaculture (NFR, 2022-2027)
  • RASbiome: Microbial management in RAS for sustainable aquaculture production (Bluebio Cofund; 2021-2024)
  • RASOPTA: Safeguarding future production of fish in aquaculture systems with water recirculation (H2020-MSCA-ITN; 2021-2024)
  • Janthinobacterium: en kandidat for bærekraftig forebyggende behandling av saprolegniose egg og plommesekkyngel av laks (RFF Trøndelag; 2021-2022)
  • MicroMucus: Microbial contributions to the Atlantic salmon (Salmo salar) skin mucosal barrier (NFR-FriPro; 2017-2021)
  •  

Teaching:

  • Responsible for the course TBT4130 Environmental Biotechnology
  • Involved in teaching the course BT8101 Microbial Ecology

Lenke: http://www.ntnu.no/bioteknologi/miljobiotek

 

Publications

  • Chronological
  • By category
  • See all publications in Cristin

2023

  • Dahle, Stine Veronica Wiborg; Gaarden, Sunniva Ingebrigtsen; Buhaug, Julia Fossberg; Netzer, Roman; Attramadal, Kari; Busche, Tobias; Aas, Marianne; Ribicic, Deni; Bakke, Ingrid. (2023) Long-term microbial community structures and dynamics in a commercial RAS during seven production batches of Atlantic salmon fry (Salmo salar). Aquaculture. volum 565.
    Academic article

2022

  • Bugten, Anette Voll; Attramadal, Kari; Fossmark, Ragnhild Olsen; Rosten, Trond Waldemar; Vadstein, Olav; Bakke, Ingrid. (2022) Changes in rearing water microbiomes in RAS induced by membrane filtration alters the hindgut microbiomes of Atlantic salmon (Salmo salar) parr. Aquaculture. volum 548 (2).
    Academic article
  • Vestrum, Ragnhild Inderberg; Forberg, Torunn; Luef, Birgit; Bakke, Ingrid; Winge, Per; Olsen, Yngvar; Vadstein, Olav. (2022) Commensal and opportunistic bacteria present in the microbiota in atlantic cod (Gadus morhua) larvae differentially alter the hosts’ innate immune responses. Microorganisms. volum 10 (1).
    Academic article

2021

  • Attramadal, Kari J.K.; Øien, John Vegard; Kristensen, Elisabeth; Evjemo, Jan Ove; Kjørsvik, Elin; Vadstein, Olav; Bakke, Ingrid. (2021) UV treatment in RAS influences the rearing water microbiota and reduces the survival of European lobster larvae (Homarus gammarus). Aquacultural Engineering. volum 94.
    Academic article
  • Dahle, Stine Veronica Wiborg; Attramadal, Kari; Vadstein, Olav; Hestdahl, Hans Ivar; Bakke, Ingrid. (2021) Microbial community dynamics in a commercial RAS for production of Atlantic salmon fry (Salmo salar). Aquaculture. volum 546.
    Academic article
  • Dunker, Karen; Gomez de la Torre Canny, Sol; Nordgård, Catherine Taylor; Dague, Etienne; Formosa-Dague, Cecile; Bakke, Ingrid; Sletmoen, Marit. (2021) Elucidating bacterial adhesion to mucosal surface by an original AFM approach. BMC Microbiology. volum 21.
    Academic article
  • Gonzalez Silva, Blanca Magdalena; Jonassen, Kjell Rune; Bakke, Ingrid; Østgaard, Kjetill; Vadstein, Olav. (2021) Understanding structure/function relationships in nitrifying microbial communities after cross-transfer between freshwater and seawater. Scientific Reports. volum 11 (2979).
    Academic article
  • Gundersen, Madeleine S.; Vadstein, Olav; Bakke, Ingrid; Andersen, Tom; Morelan, Ian. (2021) The effect of periodic disturbances and carrying capacity on the significance of selection and drift in complex bacterial communities. ISME Communications.
    Academic article
  • Lofthus, Synnøve; Bakke, Ingrid; Greer, Charles W.; Brakstad, Odd Gunnar. (2021) Biodegradation of weathered crude oil by microbial communities in solid and melted sea ice. Marine Pollution Bulletin. volum 172.
    Academic article
  • Nikouli, Eleni; Kormas, Konstantinos Ar.; Jin, Yang; Olsen, Yngvar; Bakke, Ingrid; Vadstein, Olav. (2021) Dietary Lipid Effects on Gut Microbiota of First Feeding Atlantic Salmon (Salmo salar L.). Frontiers in Marine Science. volum 8.
    Academic article

2020

  • Fossmark, Ragnhild Olsen; Vadstein, Olav; Rosten, Trond Waldemar; Bakke, Ingrid; Koseto, Deni; Bugten, Anette Voll; Helberg, Gaute Alexander Nedberg; Nesje, Jenny; Jørgensen, Niels O.G.; Raspati, Gema Sakti; Azrague, Kamal; Østerhus, Stein Wold; Attramadal, Kari. (2020) Effects of reduced organic matter loading through membrane filtration on the microbial community dynamics in recirculating aquaculture systems (RAS) with Atlantic salmon parr (Salmo salar). Aquaculture. volum 524.
    Academic article
  • Bakke, Ingrid; Gomez de la Torre Canny, Sol; Nordgård, Catherine Taylor; Vadstein, Olav; Dunker, Karen; Sletmoen, Marit. (2020) Bakterier på lakseskinn – har de noen funksjon?. Norsk Fiskeoppdrett.
    Popular scientific article
  • Bakke, Ingrid; Gomez de la Torre Canny, Sol; Nordgård, Catherine Taylor; Vadstein, Olav; Dunker, Karen; Sletmoen, Marit. (2020) Bakterier på lakseskinn – har de noen funksjon?. Kyst.no.
    Popular scientific article
  • Dahle, Stine Veronica Wiborg; Bakke, Ingrid; Birkeland, Mari; Nordøy, Kristian; Dalum, Alf Seljenes; Attramadal, Kari. (2020) Production of lumpfish (Cyclopterus lumpus L.) in RAS with distinct water treatments: Effects on fish survival, growth, gill health and microbial communities in rearing water and biofilm. Aquaculture. volum 522.
    Academic article
  • Edberg, R.; Bakke, Ingrid; Kondo, H.; Sandberg, L. Ørduk; Haubro, M.L.; Guthrie, M.; Holmes, A.T.; Engqvist, J.; Wildes, A.; Matsuhira, K.; Lefmann, Kim; Deen, P.P.; Mito, M.; Henelius, P.. (2020) Effects of uniaxial pressure on the spin ice Ho2Ti2 O7. Physical review B (PRB). volum 102 (18).
    Academic article
  • Lofthus, Synnøve; Bakke, Ingrid; Tremblay, Julien; Greer, Charles W.; Brakstad, Odd Gunnar. (2020) Biodegradation of weathered crude oil in seawater with frazil ice. Marine Pollution Bulletin. volum 154.
    Academic article
  • Navada, Sharada; Knutsen, Maja F.; Bakke, Ingrid; Vadstein, Olav. (2020) Nitrifying biofilms deprived of organic carbon show higher functional resilience to increases in carbon supply. Scientific Reports. volum 10.
    Academic article
  • Nordgård, Catherine Taylor; Gomez de la Torre Canny, Sol; Dunker, Karen; Sletmoen, Marit; Bakke, Ingrid. (2020) Rheology of skin mucus from yolk-sac salmon fry. Annual Transactions - The Nordic Rheology Society. volum 28.
    Academic article
  • Vestrum, Ragnhild Inderberg; Attramadal, Kari; Vadstein, Olav; Gundersen, Madeleine Stenshorne; Bakke, Ingrid. (2020) Bacterial community assembly in Atlantic cod larvae (Gadus morhua): Contributions of ecological processes and metacommunity structure. FEMS Microbiology Ecology. volum 96 (9).
    Academic article

2019

  • Bakke, Ingrid; Attramadal, Kari; Vestrum, Ragnhild Inderberg; Vadstein, Olav. (2019) Controlling Factors for Community Assembly in Developing Cod Larvae (Gadus morhua). Microbial Communities in Aquaculture Ecosystems. Improving Productivity and Sustainability.
    Chapter

2018

  • Attramadal, Kari; Bakke, Ingrid; Vadstein, Olav. (2018) Mikrobiell kontroll i lukkede og landbaserte anlegg. Norsk Fiskeoppdrett.
    Popular scientific article
  • Nordgård, Anna Synnøve Røstad; Bergland, Wenche Hennie; Bakke, Rune; Østgaard, Kjetill; Bakke, Ingrid. (2018) Mapping anaerobic sludge bed community adaptations to manure supernatant in biogas reactors. Scientific Reports. volum 8.
    Academic article
  • Vadstein, Olav; Attramadal, Kari; Bakke, Ingrid; Forberg, Torunn; Olsen, Yngvar; Verdegem, Marc; Giatsis, Cristos; Skjermo, Jorunn; Aasen, Inga Marie; Gatesoupe, François-Joel; Dierckens, Kristof; Sorgeloos, Patrick; Bossier, Peter. (2018) Managing the microbial community of marine fish larvae: a holistic perspective for larviculture. Frontiers in Microbiology. volum 9.
    Scientific translation/review
  • Vadstein, Olav; Attramadal, Kari; Bakke, Ingrid; Olsen, Yngvar. (2018) K-selection as microbial community management strategy: A method for improved viability of larvae in aquaculture. Frontiers in Microbiology. volum 9.
    Scientific translation/review
  • Vestrum, Ragnhild Inderberg; Attramadal, Kari; Winge, Per; Li, Keshuai; Olsen, Yngvar; Bones, Atle M.; Vadstein, Olav; Bakke, Ingrid. (2018) Rearing water treatment induces microbial selection influencing the microbiota and pathogen associated transcripts of Cod (Gadus morhua) Larvae. Frontiers in Microbiology. volum 9 (MAY).
    Academic article
  • Vestrum, Ragnhild Inderberg; Luef, Birgit; Forberg, Torunn; Bakke, Ingrid; Vadstein, Olav. (2018) Investigating fish larvae-microbe interactions in the 21st century: Old questions studied with new tools. Emerging Issues in Fish Larvae Research.
    Chapter

2017

  • Gonzalez Silva, Blanca Magdalena; Rønning, Are J.; Andreassen, Ingrid Krogrud; Bakke, Ingrid; Cervantes, Francisco J.; Østgaard, Kjetill; Vadstein, Olav. (2017) Changes in the microbial community of an anammox consortium during adaptation to marine conditions revealed by 454 pyrosequencing. Applied Microbiology and Biotechnology. volum 101 (12).
    Academic article
  • Nordgård, Anna Synnøve Røstad; Bergland, Wenche Hennie; Vadstein, Olav; Mironov, Vladimir; Bakke, Rune; Østgaard, Kjetill; Bakke, Ingrid. (2017) Anaerobic digestion of pig manure supernatant at high ammonia concentrations characterized by high abundances of Methanosaeta and non-euryarchaeotal archaea. Scientific Reports. volum 7:15077.
    Academic article
  • Trinh, Thi Truc Ly; Bakke, Ingrid; Vadstein, Olav. (2017) Correlations of age and growth rate with microbiota composition in Atlantic cod (Gadus morhua) larvae. Scientific Reports. volum 7 (1).
    Academic article

2016

  • Attramadal, Kari; Minniti, Giusi; Øie, Gunvor; Kjørsvik, Elin; Østensen, Mari-Ann; Bakke, Ingrid; Vadstein, Olav. (2016) Microbial maturation of intake water at different carrying capacities affects microbial control in rearing tanks for marine fish larvae. Aquaculture. volum 457.
    Academic article
  • Bakke, Ingrid; Åm, Ann Louise; Kolarevic, Jelena; Ytrestøyl, Trine; Vadstein, Olav; Attramadal, Kari Johanne Kihle; Terjesen, Bendik Fyhn. (2016) Microbial community dynamics in semi-commercial RAS for production of Atlantic salmon post-smolts at different salinities. Aquacultural Engineering. volum 78.
    Academic article
  • Forberg, Torunn; Sjulstad, Eli Bjørnø; Bakke, Ingrid; Olsen, Yngvar; Hagiwara, Atsushi; Sakakura, Yoshitaka; Vadstein, Olav. (2016) Correlation between microbiota and growth in Mangrove Killifish (Kryptolebias marmoratus) and Atlantic cod (Gadus morhua). Scientific Reports. volum 6.
    Academic article
  • Gonzalez Silva, Blanca Magdalena; Jonassen, Kjell Rune; Bakke, Ingrid; Østgaard, Kjetill; Vadstein, Olav. (2016) Nitrification at different salinities: Biofilm community composition and physiological plasticity. Water Research. volum 95.
    Academic article
  • Henry, Ingrid Annemarie; Einbu, Aslak; Svendsen, Hallvard Fjøsne; Bakke, Ingrid; Østgaard, Kjetill. (2016) Inhibition factors in biofilm N removal systems treating wastes generated by amine based CO2 capture. International Journal of Greenhouse Gas Control. volum 45.
    Academic article

2015

  • Bakke, Ingrid; Coward, Eivind; Andersen, Tom; Vadstein, Olav. (2015) Selection in the host structures the microbiota associated with developing cod larvae (Gadus morhua). Environmental Microbiology. volum 17 (10).
    Academic article
  • Bergland, Wenche Hennie; Dinamarca, Carlos; Torabzadegan, Mehrdad; Nordgård, Anna Synnøve Røstad; Bakke, Ingrid; Bakke, Rune. (2015) High rate manure supernatant digestion. Water Research. volum 76.
    Academic article
  • Nordgård, Anna Synnøve Røstad; Bergland, Wenche Hennie; Bakke, Rune; Vadstein, Olav; Østgaard, Kjetill; Bakke, Ingrid. (2015) Microbial community dynamics and biogas production from manure fractions in sludge bed anaerobic digestion. Journal of Applied Microbiology. volum 119 (6).
    Academic article
  • Rehberg-Haas, S.; Meyer, S.; Tielmann, M.; Lippemeier, S.; Vadstein, Olav; Bakke, Ingrid; Kjørsvik, Elin; Evjemo, Jan Ove; Schulz, C.. (2015) Use of the microalga Pavlova viridis as enrichment product for the feeding of Atlantic cod larvae (Gadus morhua). Aquaculture. volum 438.
    Academic article
  • Skjermo, Jorunn; Bakke, Ingrid; Dahle, Stine Veronica Wiborg; Vadstein, Olav. (2015) Probiotic strains introduced through live feed and rearingwater have low colonizing success in developing Atlantic cod larvae. Aquaculture. volum 438.
    Academic article

2014

  • Attramadal, Kari; Minniti, Giusi; Øie, Gunvor; Kjørsvik, Elin; Østensen, Mari-Ann; Bakke, Ingrid; Vadstein, Olav. (2014) Microbial control of the rearing water of larvae. Production of ballan wrasse (Labrus bergylta). Science and Practice.
    Chapter
  • Attramadal, Kari; Troung, Thi My Hanh; Bakke, Ingrid; Skjermo, Jorunn; Olsen, Yngvar; Vadstein, Olav. (2014) RAS and microbial maturation as tools for K-selection of microbial communities improve survival in cod larvae. Aquaculture. volum 432.
    Academic article
  • Jørgensen, Tor Erik; Bakke, Ingrid; Ursvik, anita; Andreassen, morten; Moum, Truls; Johansen, Steinar Daae. (2014) An evolutionary preserved intergenic spacer in gadiform mitogenomes generates a long noncoding RNA. BMC Evolutionary Biology. volum 14 (1).
    Academic article
  • Wold, Per-Arvid; Holan, Astrid Buran; Øie, Gunvor; Attramadal, Kari; Bakke, Ingrid; Vadstein, Olav; Leiknes, TorOve. (2014) Effects of membrane filtration on bacterial number and microbial diversity in marine recirculating aquaculture system (RAS) for Atlantic cod (Gadus morhua L.) production. Aquaculture. volum 422-423.
    Academic article

2013

  • Bakke, Ingrid; Skjermo, Jorunn; Vo, Tu Anh; Vadstein, Olav. (2013) Live feed is not a major determinant of the microbiota associated with cod larvae (Gadus morhua). Environmental Microbiology Reports. volum 5 (4).
    Academic article
  • Li, Keshuai; Østensen, Mari-Ann; Attramadal, Kari; Winge, Per; Sparstad, Torfinn; Bakke, Ingrid; Bones, Atle M.; Vadstein, Olav; Kjørsvik, Elin; Olsen, Yngvar. (2013) Gene regulation of Atlantic cod (Gadus morhua) larvae with focus on lipid digestion and phospholipid metabolism. Communications in agricultural and applied biological sciences. volum 78 (4).
    Academic article
  • Vik, Unni; Logares, Ramiro; Blaalid, Rakel; Halvorsen, Rune; Carlsen, Tor; Bakke, Ingrid; Kolstø, Anne-Brit; Økstad, Ole Andreas Løchen; Kauserud, Håvard. (2013) Different bacterial communities in ectomycorrhizae and surrounding soil. Scientific Reports. volum 3 (347).
    Academic article

2012

  • Berg, Laila; Kucharova, Veronika; Bakke, Ingrid; Valla, Svein; Brautaset, Trygve. (2012) Exploring the 5 '-UTR DNA region as a target for optimizing recombinant gene expression from the strong and inducible Pm promoter in Escherichia coli. Journal of Biotechnology. volum 158 (4).
    Academic article

2011

  • Bakke, Ingrid; De Schryver, Peter; Boon, Nico; Vadstein, Olav. (2011) PCR-based community structure studies of Bacteria associated with eukaryotic organisms: A simple PCR strategy to avoid co-amplification of eukaryotic DNA. Journal of Microbiological Methods. volum 84 (2).
    Academic article
  • Brautaset, Trygve; Sletta, Håvard; Degnes, Kristin Fløgstad; Sekurova, Olga; Bakke, Ingrid; Volokhan, Olga; Andreassen, Trygve; Ellingsen, Trond Erling; Zotchev, Sergey. (2011) New nystatin-related antifungal polyene macrolides with altered polyol region generated via biosynthetic engineering of Streptomyces noursei. Applied and Environmental Microbiology. volum 77 (18).
    Academic article

2010

  • Aune, Trond Erik Vee; Bakke, Ingrid; Drabløs, Finn; Lale, Rahmi; Brautaset, Trygve; Valla, Svein. (2010) Directed evolution of the transcription factor XylS for development of improved expression systems. Microbial Biotechnology. volum 3 (1).
    Academic article
  • Norberg, Anne Line; Karlsen, Vigdis; Hoell, Ingunn; Bakke, Ingrid; Eijsink, Vincent; Sørlie, Morten. (2010) Determination of substrate binding energies in individual subsites of a family 18 chitinase. FEBS Letters. volum 584 (22).
    Academic article

2009

  • Bakke, Ingrid; Berg, Laila; Aune, Trond Erik Vee; Brautaset, Trygve; Sletta, Håvard; Tøndervik, Anne; Valla, Svein. (2009) Random Mutagenesis of the Pm Promoter as a Powerful Strategy for Improvement of Recombinant-Gene Expression. Applied and Environmental Microbiology. volum 75 (7).
    Academic article
  • Berg, Laila; Lale, Rahmi; Bakke, Ingrid; Burroughs, Nigel; Valla, Svein. (2009) The expression of recombinant genes in Escherichia coli can be strongly stimulated at the transcript production level by mutating the DNA-region corresponding to the 5'-untranslated part of mRNA. Microbial Biotechnology. volum 2 (3).
    Academic article

2008

  • Brautaset, Trygve; Sletta, Håvard; Nedal, Aina; Borgos, Sven Even F.; Degnes, Kristin F.; Bakke, Ingrid; Volokhan, Olga; Sekurova, Olga N.; Treshalin, Ivan D.; Mirchink, Elena P.; Dikiy, Alexander; Ellingsen, Trond Erling; Zotchev, Sergey. (2008) Improved Antifungal Polyene Macrolides via Engineering of the Nystatin Biosynthetic Genes in Streptomyces noursei. Chemistry and Biology. volum 15 (11).
    Academic article

2005

  • Johansen, Steinar D.; Bakke, Ingrid. (2005) Molecular phylogenetics of Gadidae and related Gadiformes based on mitochondrial DNA sequences. Marine Biotechnology. volum 7 (1).
    Academic article
  • Bakke, Ingrid; Johansen, Steinar. (2005) Molecular phylogenetics of Gadidae and related Gadiformes based on mitochondrial DNA sequences. Marine Biotechnology. volum 7.
    Academic article

2002

  • Bakke, Ingrid; Johansen, Steinar. (2002) Characterization of the mitochondrial ribosomal RNA genes in gadoids: sequence variation, secondary structure and phylogenetic implications. Molecular Phylogenetics and Evolution. volum 25.
    Academic article

Scientific articles

  • Dahle, Stine Veronica Wiborg; Gaarden, Sunniva Ingebrigtsen; Buhaug, Julia Fossberg; Netzer, Roman; Attramadal, Kari; Busche, Tobias; Aas, Marianne; Ribicic, Deni; Bakke, Ingrid. (2023) Long-term microbial community structures and dynamics in a commercial RAS during seven production batches of Atlantic salmon fry (Salmo salar). Aquaculture. volum 565.
    Academic article
  • Bugten, Anette Voll; Attramadal, Kari; Fossmark, Ragnhild Olsen; Rosten, Trond Waldemar; Vadstein, Olav; Bakke, Ingrid. (2022) Changes in rearing water microbiomes in RAS induced by membrane filtration alters the hindgut microbiomes of Atlantic salmon (Salmo salar) parr. Aquaculture. volum 548 (2).
    Academic article
  • Vestrum, Ragnhild Inderberg; Forberg, Torunn; Luef, Birgit; Bakke, Ingrid; Winge, Per; Olsen, Yngvar; Vadstein, Olav. (2022) Commensal and opportunistic bacteria present in the microbiota in atlantic cod (Gadus morhua) larvae differentially alter the hosts’ innate immune responses. Microorganisms. volum 10 (1).
    Academic article
  • Attramadal, Kari J.K.; Øien, John Vegard; Kristensen, Elisabeth; Evjemo, Jan Ove; Kjørsvik, Elin; Vadstein, Olav; Bakke, Ingrid. (2021) UV treatment in RAS influences the rearing water microbiota and reduces the survival of European lobster larvae (Homarus gammarus). Aquacultural Engineering. volum 94.
    Academic article
  • Dahle, Stine Veronica Wiborg; Attramadal, Kari; Vadstein, Olav; Hestdahl, Hans Ivar; Bakke, Ingrid. (2021) Microbial community dynamics in a commercial RAS for production of Atlantic salmon fry (Salmo salar). Aquaculture. volum 546.
    Academic article
  • Dunker, Karen; Gomez de la Torre Canny, Sol; Nordgård, Catherine Taylor; Dague, Etienne; Formosa-Dague, Cecile; Bakke, Ingrid; Sletmoen, Marit. (2021) Elucidating bacterial adhesion to mucosal surface by an original AFM approach. BMC Microbiology. volum 21.
    Academic article
  • Gonzalez Silva, Blanca Magdalena; Jonassen, Kjell Rune; Bakke, Ingrid; Østgaard, Kjetill; Vadstein, Olav. (2021) Understanding structure/function relationships in nitrifying microbial communities after cross-transfer between freshwater and seawater. Scientific Reports. volum 11 (2979).
    Academic article
  • Gundersen, Madeleine S.; Vadstein, Olav; Bakke, Ingrid; Andersen, Tom; Morelan, Ian. (2021) The effect of periodic disturbances and carrying capacity on the significance of selection and drift in complex bacterial communities. ISME Communications.
    Academic article
  • Lofthus, Synnøve; Bakke, Ingrid; Greer, Charles W.; Brakstad, Odd Gunnar. (2021) Biodegradation of weathered crude oil by microbial communities in solid and melted sea ice. Marine Pollution Bulletin. volum 172.
    Academic article
  • Nikouli, Eleni; Kormas, Konstantinos Ar.; Jin, Yang; Olsen, Yngvar; Bakke, Ingrid; Vadstein, Olav. (2021) Dietary Lipid Effects on Gut Microbiota of First Feeding Atlantic Salmon (Salmo salar L.). Frontiers in Marine Science. volum 8.
    Academic article
  • Fossmark, Ragnhild Olsen; Vadstein, Olav; Rosten, Trond Waldemar; Bakke, Ingrid; Koseto, Deni; Bugten, Anette Voll; Helberg, Gaute Alexander Nedberg; Nesje, Jenny; Jørgensen, Niels O.G.; Raspati, Gema Sakti; Azrague, Kamal; Østerhus, Stein Wold; Attramadal, Kari. (2020) Effects of reduced organic matter loading through membrane filtration on the microbial community dynamics in recirculating aquaculture systems (RAS) with Atlantic salmon parr (Salmo salar). Aquaculture. volum 524.
    Academic article
  • Dahle, Stine Veronica Wiborg; Bakke, Ingrid; Birkeland, Mari; Nordøy, Kristian; Dalum, Alf Seljenes; Attramadal, Kari. (2020) Production of lumpfish (Cyclopterus lumpus L.) in RAS with distinct water treatments: Effects on fish survival, growth, gill health and microbial communities in rearing water and biofilm. Aquaculture. volum 522.
    Academic article
  • Edberg, R.; Bakke, Ingrid; Kondo, H.; Sandberg, L. Ørduk; Haubro, M.L.; Guthrie, M.; Holmes, A.T.; Engqvist, J.; Wildes, A.; Matsuhira, K.; Lefmann, Kim; Deen, P.P.; Mito, M.; Henelius, P.. (2020) Effects of uniaxial pressure on the spin ice Ho2Ti2 O7. Physical review B (PRB). volum 102 (18).
    Academic article
  • Lofthus, Synnøve; Bakke, Ingrid; Tremblay, Julien; Greer, Charles W.; Brakstad, Odd Gunnar. (2020) Biodegradation of weathered crude oil in seawater with frazil ice. Marine Pollution Bulletin. volum 154.
    Academic article
  • Navada, Sharada; Knutsen, Maja F.; Bakke, Ingrid; Vadstein, Olav. (2020) Nitrifying biofilms deprived of organic carbon show higher functional resilience to increases in carbon supply. Scientific Reports. volum 10.
    Academic article
  • Nordgård, Catherine Taylor; Gomez de la Torre Canny, Sol; Dunker, Karen; Sletmoen, Marit; Bakke, Ingrid. (2020) Rheology of skin mucus from yolk-sac salmon fry. Annual Transactions - The Nordic Rheology Society. volum 28.
    Academic article
  • Vestrum, Ragnhild Inderberg; Attramadal, Kari; Vadstein, Olav; Gundersen, Madeleine Stenshorne; Bakke, Ingrid. (2020) Bacterial community assembly in Atlantic cod larvae (Gadus morhua): Contributions of ecological processes and metacommunity structure. FEMS Microbiology Ecology. volum 96 (9).
    Academic article
  • Nordgård, Anna Synnøve Røstad; Bergland, Wenche Hennie; Bakke, Rune; Østgaard, Kjetill; Bakke, Ingrid. (2018) Mapping anaerobic sludge bed community adaptations to manure supernatant in biogas reactors. Scientific Reports. volum 8.
    Academic article
  • Vestrum, Ragnhild Inderberg; Attramadal, Kari; Winge, Per; Li, Keshuai; Olsen, Yngvar; Bones, Atle M.; Vadstein, Olav; Bakke, Ingrid. (2018) Rearing water treatment induces microbial selection influencing the microbiota and pathogen associated transcripts of Cod (Gadus morhua) Larvae. Frontiers in Microbiology. volum 9 (MAY).
    Academic article
  • Gonzalez Silva, Blanca Magdalena; Rønning, Are J.; Andreassen, Ingrid Krogrud; Bakke, Ingrid; Cervantes, Francisco J.; Østgaard, Kjetill; Vadstein, Olav. (2017) Changes in the microbial community of an anammox consortium during adaptation to marine conditions revealed by 454 pyrosequencing. Applied Microbiology and Biotechnology. volum 101 (12).
    Academic article
  • Nordgård, Anna Synnøve Røstad; Bergland, Wenche Hennie; Vadstein, Olav; Mironov, Vladimir; Bakke, Rune; Østgaard, Kjetill; Bakke, Ingrid. (2017) Anaerobic digestion of pig manure supernatant at high ammonia concentrations characterized by high abundances of Methanosaeta and non-euryarchaeotal archaea. Scientific Reports. volum 7:15077.
    Academic article
  • Trinh, Thi Truc Ly; Bakke, Ingrid; Vadstein, Olav. (2017) Correlations of age and growth rate with microbiota composition in Atlantic cod (Gadus morhua) larvae. Scientific Reports. volum 7 (1).
    Academic article
  • Attramadal, Kari; Minniti, Giusi; Øie, Gunvor; Kjørsvik, Elin; Østensen, Mari-Ann; Bakke, Ingrid; Vadstein, Olav. (2016) Microbial maturation of intake water at different carrying capacities affects microbial control in rearing tanks for marine fish larvae. Aquaculture. volum 457.
    Academic article
  • Bakke, Ingrid; Åm, Ann Louise; Kolarevic, Jelena; Ytrestøyl, Trine; Vadstein, Olav; Attramadal, Kari Johanne Kihle; Terjesen, Bendik Fyhn. (2016) Microbial community dynamics in semi-commercial RAS for production of Atlantic salmon post-smolts at different salinities. Aquacultural Engineering. volum 78.
    Academic article
  • Forberg, Torunn; Sjulstad, Eli Bjørnø; Bakke, Ingrid; Olsen, Yngvar; Hagiwara, Atsushi; Sakakura, Yoshitaka; Vadstein, Olav. (2016) Correlation between microbiota and growth in Mangrove Killifish (Kryptolebias marmoratus) and Atlantic cod (Gadus morhua). Scientific Reports. volum 6.
    Academic article
  • Gonzalez Silva, Blanca Magdalena; Jonassen, Kjell Rune; Bakke, Ingrid; Østgaard, Kjetill; Vadstein, Olav. (2016) Nitrification at different salinities: Biofilm community composition and physiological plasticity. Water Research. volum 95.
    Academic article
  • Henry, Ingrid Annemarie; Einbu, Aslak; Svendsen, Hallvard Fjøsne; Bakke, Ingrid; Østgaard, Kjetill. (2016) Inhibition factors in biofilm N removal systems treating wastes generated by amine based CO2 capture. International Journal of Greenhouse Gas Control. volum 45.
    Academic article
  • Bakke, Ingrid; Coward, Eivind; Andersen, Tom; Vadstein, Olav. (2015) Selection in the host structures the microbiota associated with developing cod larvae (Gadus morhua). Environmental Microbiology. volum 17 (10).
    Academic article
  • Bergland, Wenche Hennie; Dinamarca, Carlos; Torabzadegan, Mehrdad; Nordgård, Anna Synnøve Røstad; Bakke, Ingrid; Bakke, Rune. (2015) High rate manure supernatant digestion. Water Research. volum 76.
    Academic article
  • Nordgård, Anna Synnøve Røstad; Bergland, Wenche Hennie; Bakke, Rune; Vadstein, Olav; Østgaard, Kjetill; Bakke, Ingrid. (2015) Microbial community dynamics and biogas production from manure fractions in sludge bed anaerobic digestion. Journal of Applied Microbiology. volum 119 (6).
    Academic article
  • Rehberg-Haas, S.; Meyer, S.; Tielmann, M.; Lippemeier, S.; Vadstein, Olav; Bakke, Ingrid; Kjørsvik, Elin; Evjemo, Jan Ove; Schulz, C.. (2015) Use of the microalga Pavlova viridis as enrichment product for the feeding of Atlantic cod larvae (Gadus morhua). Aquaculture. volum 438.
    Academic article
  • Skjermo, Jorunn; Bakke, Ingrid; Dahle, Stine Veronica Wiborg; Vadstein, Olav. (2015) Probiotic strains introduced through live feed and rearingwater have low colonizing success in developing Atlantic cod larvae. Aquaculture. volum 438.
    Academic article
  • Attramadal, Kari; Troung, Thi My Hanh; Bakke, Ingrid; Skjermo, Jorunn; Olsen, Yngvar; Vadstein, Olav. (2014) RAS and microbial maturation as tools for K-selection of microbial communities improve survival in cod larvae. Aquaculture. volum 432.
    Academic article
  • Jørgensen, Tor Erik; Bakke, Ingrid; Ursvik, anita; Andreassen, morten; Moum, Truls; Johansen, Steinar Daae. (2014) An evolutionary preserved intergenic spacer in gadiform mitogenomes generates a long noncoding RNA. BMC Evolutionary Biology. volum 14 (1).
    Academic article
  • Wold, Per-Arvid; Holan, Astrid Buran; Øie, Gunvor; Attramadal, Kari; Bakke, Ingrid; Vadstein, Olav; Leiknes, TorOve. (2014) Effects of membrane filtration on bacterial number and microbial diversity in marine recirculating aquaculture system (RAS) for Atlantic cod (Gadus morhua L.) production. Aquaculture. volum 422-423.
    Academic article
  • Bakke, Ingrid; Skjermo, Jorunn; Vo, Tu Anh; Vadstein, Olav. (2013) Live feed is not a major determinant of the microbiota associated with cod larvae (Gadus morhua). Environmental Microbiology Reports. volum 5 (4).
    Academic article
  • Li, Keshuai; Østensen, Mari-Ann; Attramadal, Kari; Winge, Per; Sparstad, Torfinn; Bakke, Ingrid; Bones, Atle M.; Vadstein, Olav; Kjørsvik, Elin; Olsen, Yngvar. (2013) Gene regulation of Atlantic cod (Gadus morhua) larvae with focus on lipid digestion and phospholipid metabolism. Communications in agricultural and applied biological sciences. volum 78 (4).
    Academic article
  • Vik, Unni; Logares, Ramiro; Blaalid, Rakel; Halvorsen, Rune; Carlsen, Tor; Bakke, Ingrid; Kolstø, Anne-Brit; Økstad, Ole Andreas Løchen; Kauserud, Håvard. (2013) Different bacterial communities in ectomycorrhizae and surrounding soil. Scientific Reports. volum 3 (347).
    Academic article
  • Berg, Laila; Kucharova, Veronika; Bakke, Ingrid; Valla, Svein; Brautaset, Trygve. (2012) Exploring the 5 '-UTR DNA region as a target for optimizing recombinant gene expression from the strong and inducible Pm promoter in Escherichia coli. Journal of Biotechnology. volum 158 (4).
    Academic article
  • Bakke, Ingrid; De Schryver, Peter; Boon, Nico; Vadstein, Olav. (2011) PCR-based community structure studies of Bacteria associated with eukaryotic organisms: A simple PCR strategy to avoid co-amplification of eukaryotic DNA. Journal of Microbiological Methods. volum 84 (2).
    Academic article
  • Brautaset, Trygve; Sletta, Håvard; Degnes, Kristin Fløgstad; Sekurova, Olga; Bakke, Ingrid; Volokhan, Olga; Andreassen, Trygve; Ellingsen, Trond Erling; Zotchev, Sergey. (2011) New nystatin-related antifungal polyene macrolides with altered polyol region generated via biosynthetic engineering of Streptomyces noursei. Applied and Environmental Microbiology. volum 77 (18).
    Academic article
  • Aune, Trond Erik Vee; Bakke, Ingrid; Drabløs, Finn; Lale, Rahmi; Brautaset, Trygve; Valla, Svein. (2010) Directed evolution of the transcription factor XylS for development of improved expression systems. Microbial Biotechnology. volum 3 (1).
    Academic article
  • Norberg, Anne Line; Karlsen, Vigdis; Hoell, Ingunn; Bakke, Ingrid; Eijsink, Vincent; Sørlie, Morten. (2010) Determination of substrate binding energies in individual subsites of a family 18 chitinase. FEBS Letters. volum 584 (22).
    Academic article
  • Bakke, Ingrid; Berg, Laila; Aune, Trond Erik Vee; Brautaset, Trygve; Sletta, Håvard; Tøndervik, Anne; Valla, Svein. (2009) Random Mutagenesis of the Pm Promoter as a Powerful Strategy for Improvement of Recombinant-Gene Expression. Applied and Environmental Microbiology. volum 75 (7).
    Academic article
  • Berg, Laila; Lale, Rahmi; Bakke, Ingrid; Burroughs, Nigel; Valla, Svein. (2009) The expression of recombinant genes in Escherichia coli can be strongly stimulated at the transcript production level by mutating the DNA-region corresponding to the 5'-untranslated part of mRNA. Microbial Biotechnology. volum 2 (3).
    Academic article
  • Brautaset, Trygve; Sletta, Håvard; Nedal, Aina; Borgos, Sven Even F.; Degnes, Kristin F.; Bakke, Ingrid; Volokhan, Olga; Sekurova, Olga N.; Treshalin, Ivan D.; Mirchink, Elena P.; Dikiy, Alexander; Ellingsen, Trond Erling; Zotchev, Sergey. (2008) Improved Antifungal Polyene Macrolides via Engineering of the Nystatin Biosynthetic Genes in Streptomyces noursei. Chemistry and Biology. volum 15 (11).
    Academic article
  • Johansen, Steinar D.; Bakke, Ingrid. (2005) Molecular phylogenetics of Gadidae and related Gadiformes based on mitochondrial DNA sequences. Marine Biotechnology. volum 7 (1).
    Academic article
  • Bakke, Ingrid; Johansen, Steinar. (2005) Molecular phylogenetics of Gadidae and related Gadiformes based on mitochondrial DNA sequences. Marine Biotechnology. volum 7.
    Academic article
  • Bakke, Ingrid; Johansen, Steinar. (2002) Characterization of the mitochondrial ribosomal RNA genes in gadoids: sequence variation, secondary structure and phylogenetic implications. Molecular Phylogenetics and Evolution. volum 25.
    Academic article

Journal publications

  • Bakke, Ingrid; Gomez de la Torre Canny, Sol; Nordgård, Catherine Taylor; Vadstein, Olav; Dunker, Karen; Sletmoen, Marit. (2020) Bakterier på lakseskinn – har de noen funksjon?. Norsk Fiskeoppdrett.
    Popular scientific article
  • Bakke, Ingrid; Gomez de la Torre Canny, Sol; Nordgård, Catherine Taylor; Vadstein, Olav; Dunker, Karen; Sletmoen, Marit. (2020) Bakterier på lakseskinn – har de noen funksjon?. Kyst.no.
    Popular scientific article
  • Attramadal, Kari; Bakke, Ingrid; Vadstein, Olav. (2018) Mikrobiell kontroll i lukkede og landbaserte anlegg. Norsk Fiskeoppdrett.
    Popular scientific article
  • Vadstein, Olav; Attramadal, Kari; Bakke, Ingrid; Forberg, Torunn; Olsen, Yngvar; Verdegem, Marc; Giatsis, Cristos; Skjermo, Jorunn; Aasen, Inga Marie; Gatesoupe, François-Joel; Dierckens, Kristof; Sorgeloos, Patrick; Bossier, Peter. (2018) Managing the microbial community of marine fish larvae: a holistic perspective for larviculture. Frontiers in Microbiology. volum 9.
    Scientific translation/review
  • Vadstein, Olav; Attramadal, Kari; Bakke, Ingrid; Olsen, Yngvar. (2018) K-selection as microbial community management strategy: A method for improved viability of larvae in aquaculture. Frontiers in Microbiology. volum 9.
    Scientific translation/review

Part of book/report

  • Bakke, Ingrid; Attramadal, Kari; Vestrum, Ragnhild Inderberg; Vadstein, Olav. (2019) Controlling Factors for Community Assembly in Developing Cod Larvae (Gadus morhua). Microbial Communities in Aquaculture Ecosystems. Improving Productivity and Sustainability.
    Chapter
  • Vestrum, Ragnhild Inderberg; Luef, Birgit; Forberg, Torunn; Bakke, Ingrid; Vadstein, Olav. (2018) Investigating fish larvae-microbe interactions in the 21st century: Old questions studied with new tools. Emerging Issues in Fish Larvae Research.
    Chapter
  • Attramadal, Kari; Minniti, Giusi; Øie, Gunvor; Kjørsvik, Elin; Østensen, Mari-Ann; Bakke, Ingrid; Vadstein, Olav. (2014) Microbial control of the rearing water of larvae. Production of ballan wrasse (Labrus bergylta). Science and Practice.
    Chapter

Teaching

Courses

  • BI3911 - Master thesis in MSAQUAH Health Management in Aquaculture
  • TBT4130 - Environmental Biotechnology
  • BT8101 - Microbial Ecology

Media

2022

  • Academic lecture
    Bugten, Anette Voll; Attramadal, Kari Johanne Kihle; Fossmark, Ragnhild Olsen; Rosten, Trond Waldemar; Vadstein, Olav; Bakke, Ingrid. (2022) The relationship between fish and water microbiota in RAS: influence of organic loading. 2022 International Conference on international Cooperation and Integration of Industry, Education, Research and Application for Future Ocean (Qingdao) . Ocean University of China; Digital. 2022-11-27 - 2022-11-28.
  • Academic lecture
    Bugten, Anette Voll; Attramadal, Kari Johanne Kihle; Fossmark, Ragnhild Olsen; Rosten, Trond Waldemar; Vadstein, Olav; Bakke, Ingrid. (2022) The relationship between rearing water and fish microbiomes in RAS for smolt production: Impact of membrane filtration and organic loading. Aquaculture Europe . EAS; Rimini. 2022-09-26 - 2022-09-30.
  • Poster
    Fiedler, Alexander Willi; Gomez de la Torre Canny, Sol; Drågen, Martha Kristine Rindarøy; Lorentsen, Eirik Degre; Bakke, Ingrid; Vadstein, Olav. (2022) The early gut and skin microbiota of Atlantic salmon yolk sac fry originating from two different source communities. ISME18 Konferanse . ISME; Lausanne. 2022-08-14 - 2022-08-19.
  • Academic lecture
    Gundersen, Madeleine S.; Morelan, Ian; Andersen, Tom; Bakke, Ingrid; Vadstein, Olav. (2022) Bacterial community assembly during disturbances. NBS Contact Meeting 2022 . NBS; Tromsø. 2022-02-10 - 2022-02-13.
  • Poster
    Gundersen, Madeleine S.; Morelan, Ian; Bakke, Ingrid; Andersen, Tom; Vadstein, Olav. (2022) Disturbances increase selection – whereas stability promotes stochastic assembly in bacterial communities. ISME18 . International Society for Microbial Ecology; Lausanne. 2022-08-15.
  • Academic lecture
    Huang, Zhitao; Risnes, Lea; Silva, Blanca Gonzalez; Østerhus, Stein Wold; Vadstein, Olav; Bakke, Ingrid. (2022) The potential application of a partial nitrification-anammox (PNA) biofilm-based process for nitrogen removal in RAS. Aquaculture Europe . EAS; Rimini. 2022-09-26 - 2022-09-30.
  • Academic lecture
    Risnes, Lea; Huang, Zhitao; Silva, Blanca Gonzalez; Østerhus, Stein Wold; Vadstein, Olav; Bakke, Ingrid. (2022) Nitrogenfjerning: Adaptasjon av delvis nitrifisering og anaerob ammonium oksidasjon til RAS-konsentrasjoner. Tekset . Sintef Ocean, FHF, Sjømat Norge, ++; Trondheim. 2022-05-04 - 2022-05-05.

2021

  • Academic lecture
    Bakke, Ingrid; Coward, Eivind; Lorentsen, Eirik Degre; Vadstein, Olav. (2021) Temporal and interindividual variation in hindgut microbiomes among four codfish species in the subfamily Gadinae. The third international fish - microbiota workshop . Chinese Academy of Agricultural Sciences; Digitalt møte på zoom. 2021-09-22 - 2021-09-24.
  • Academic lecture
    Fiedler, Alexander Willi; de la Torre Canny, Sol Gomez; Drågen, Martha Kristine Rindarøy; Lorentsen, Eirik Degre; Vadstein, Olav; Bakke, Ingrid. (2021) The initial microbiome of Atlantic salmon (Salmo salar) yolk sac fry. The third international fish - microbiota workshop . Chinese Academy of Agricultural Sciences; Digital konferanse. 2021-09-22 - 2021-09-24.
  • Poster
    Langeloh, Hendrik; Leirvik, Frode; Øverjordet, Ida Beathe; Bakke, Ingrid; Sørensen, Lisbet; Hakvåg, Sigrid; Brakstad, Odd Gunnar. (2021) Depletion of crude oil and fuel in the Arctic. Summer field studies with immobilized oil in seawater in Svalbard. Svalbard Science Conference ; 2021-11-02 - 2021-11-03.
  • Academic lecture
    Nordgård, Catherine Taylor; de la Torre Canny, Sol Gomez; Sletmoen, Marit; Dunker, Karen; Bakke, Ingrid. (2021) Microbial influence on the skin mucosa of yolk sac fry of Atlantic salmon. The third international fish - microbiota workshop . Chinese Academy of Agricultural Sciences; Digital konferanse. 2021-09-22 - 2021-09-24.

2020

  • Academic lecture
    Gomez de la Torre Canny, Sol; Nordgård, Catherine Taylor; Dunker, Karen; Sletmoen, Marit; Bakke, Ingrid. (2020) Microbial contributions to the skin mucosal barrier in Atlantic salmon (Salmo salar) yolk sac fry. HAVBRUK 2020 . NFR og FHF; Digital konferanse. 2020-06-09 - 2020-10-10.
  • Poster
    Gundersen, Madeleine Stenshorne; Morelan, Ian; Andersen, Tom; Bakke, Ingrid; Vadstein, Olav. (2020) The effect of periodical disturbances on selection and drift in bacterial communities. Microbiota and Health . National Doctoral Programme in Infection and Antibiotics (ND; 2020-11-30 - 2020-12-03.
  • Academic lecture
    Nordgård, Catherine Taylor; Gomez de la Torre Canny, Sol; Dunker, Karen; Sletmoen, Marit; Bakke, Ingrid. (2020) Rheology of skin mucus from yolk-sac salmon fry. Nordic Rheology Conference 2020 . Nordic Rheology Society; Cyberspace. 2020-08-25 - 2020-08-26.

2019

  • Academic lecture
    Fossmark, Ragnhild Olsen; Attramadal, Kari; Rosten, Trond Waldemar; Koseto, Deni; Nesje, Jenny; Bakke, Ingrid; Jørgensen, Niels O.G.; Raspati, Gema Sakti; Østerhus, Stein Wold; Vadstein, Olav. (2019) Microbial community dynamics in recirculating aquaculture systems rearing Atlantic salmon parr (Salmo salar) with reduced organic loading through membrane filtration. Aquaculture Europe . European Aquaculture Society (EAS); Berlin. 2019-10-07 - 2019-10-10.
  • Academic lecture
    Bakke, Ingrid; Mathisen, Amalie johanne Horn; Gomez de la Torre Canny, Sol; Olsen, Yngvar; Vadstein, Olav. (2019) Effects of host genetics and water microbiota on the colonization of gut in yolk sac salmon fry. 2nd International Fish Microbiota workshop ; Eugene, Oregon. 2019-09-03 - 2019-09-05.
  • Poster
    Dunker, Karen; Canny, Sol Gomez de la Torre; Nordgård, Catherine Taylor; Bakke, Ingrid; Vadstein, Olav; Sletmoen, Marit. (2019) Glycan-based molecular interactions and their role in bacterial surface adhesion. International symposium on glycoconjugates ; Milano. 2019-08-25 - 2019-08-31.
  • Academic lecture
    Gomez de la Torre Canny, Sol; Nordgård, Catherine Taylor; Bakke, Ingrid. (2019) A novel gnotobiotic husbandry system for the study of host-microbe interactions in Atlantic salmon yolk-sac fry (Salmo salar L.). The 2nd International Fish Microbiota workshop . Brendan Bohannan, John Rawls, Olav Vadstein, Ingrid Bakke; Eugene, Oregon. 2019-09-03 - 2019-09-05.
  • Academic lecture
    Gomez de la Torre Canny, Sol; Nordgård, Catherine Taylor; Bakke, Ingrid. (2019) A novel gnotobiotic husbandry system for the study of host-microbe interactions in Atlantic salmon yolk-sac fry (Salmo salar L.). NFM meeting 2019: A novel gnotobiotic husbandry system for the study of host-microbe interactions in Atlantic salmon yolk-sac fry (Salmo salar L.) . Norsk forening for mikrobiologi; Trondheim. 2019-06-11 - 2019-06-12.
  • Academic lecture
    Gomez de la Torre Canny, Sol; Nordgård, Catherine Taylor; Bakke, Ingrid. (2019) A novel gnotobiotic husbandry system for the study of host-microbe interactions in Atlantic salmon yolk-sac fry (Salmo salar L.). Mucosal Health in aquaculture . Nofima; Oslo. 2019-09-11 - 2019-09-13.
  • Academic lecture
    Nordgård, Catherine Taylor; Gomez de la Torre Canny, Sol; Dunker, Karen; lyseid, ragnhild; Sletmoen, Marit; Bakke, Ingrid. (2019) In situ studies of the functional barrier properties of the skin mucus of yolk-sac salmon fry. 1st International Symposium on Mucosal Health in Aquaculture . Nofima; Oslo. 2019-09-11 - 2019-09-13.
  • Lecture
    Vestrum, Ragnhild Inderberg; Attramadal, Kari; Forberg, Torunn; Winge, Per; Gundersen, Madeleine; Vadstein, Olav; Bakke, Ingrid. (2019) Host-microbiota interactions in Atlantic cod larvae. Lunsjeminar Sintef . Sintef industri; 2019-11-19.
  • Lecture
    Vestrum, Ragnhild Inderberg; Attramadal, Kari; Forberg, Torunn; Winge, Per; Gundersen, Madeleine; Vadstein, Olav; Bakke, Ingrid. (2019) Host-microbiota interactions in Atlantic cod larvae. Lunsjseminar IBT . IBT; 2019-11-13.
  • Lecture
    Vestrum, Ragnhild Inderberg; Attramadal, Kari; Vadstein, Olav; Bakke, Ingrid. (2019) The composition of the microbiota associated with cod larvae (Gadus morhua) is affected by changes in the environmental microbiota. 2nd International Fish Microbiota Workshop . University of Oregon; Eugene. 2019-09-02 - 2019-09-05.
  • Academic lecture
    Vestrum, Ragnhild Inderberg; Truong, Thi My Hanh; Attramadal, Kari; Bakke, Ingrid; Vadstein, Olav. (2019) The effect of rearing water treatments on the microbiota associated with cod larvae. NBS kontaktmøte 2019 . Norsk Biokjemisk Selskap; Røros. 2019-01-24 - 2019-01-27.
  • Academic lecture
    Vestrum, Ragnhild Inderberg; wæge, daniel; Gomez de la Torre Canny, Sol; mallasvik, hanne; Bakke, Ingrid. (2019) Bacterial colonization of the mucosal surfaces of Atlantic salmon yolk-sac fry (Salmo salar) using a gnotobiotic model system. NFM 2019: Applied and environmental microbiology . NFM (Norsk forening for mikrobiologi); Trondheim. 2019-06-11 - 2019-06-12.

2018

  • Academic lecture
    Bakke, Ingrid; Gomez de la Torre Canny, Sol. (2018) Micromucus: Germfree Atlantic salmon fry as model system for studying microbial adhesion to an intact natural mucosal surface. BioPhysAdh . LAAS, INRA, NTNU; Toulouse. 2018-09-10 - 2018-09-11.
  • Academic lecture
    Fossmark, Ragnhild Olsen; Attramadal, Kari; Bakke, Ingrid; Vadstein, Olav. (2018) Microbial Ecology in Aquaculture - Effect of organic matter on the microbial community dynamics and stability in land-based recirculating aquaculture systems for Atlantic Salmon parr (Salmo salar). Microbial Ecology in Applied and Natural Systems Workshop . Norwegian Society for Microbiology; Bergen. 2018-05-28 - 2018-05-29.
  • Academic lecture
    Lofthus, Synnøve; Bakke, Ingrid; McFarlin, Kelly Marie; Brakstad, Odd Gunnar. (2018) Biotransformation of dispersed weathered oil in frazil sea ice. 2018 Arctic and Marine Oilspill Program Technical Seminar . Environment Canada; Victoria. 2018-10-02 - 2018-10-04.
  • Poster
    Vestrum, Ragnhild Inderberg; Attramadal, Kari; Winge, Per; Li, Keshuai; Olsen, Yngvar; Bones, Atle M.; Vadstein, Olav; Bakke, Ingrid. (2018) Rearing water treatment influences the microbiota and transcript profiles of cod larvae. Nordic RAS workshop . NMBU; Oslo, NMBU. 2018-11-19 - 2018-11-20.
  • Lecture
    Vestrum, Ragnhild Inderberg; Truong, Thi My Hanh; Attramadal, Kari; Bakke, Ingrid; Vadstein, Olav. (2018) The effect of rearing water treatments on the microbiota associated with cod larvae. Microbial ecology in applied and natural systems . Norwegian Society for Microbiology (NFM); Bergen. 2018-05-28 - 2018-05-29.

2017

  • Academic lecture
    Bakke, Ingrid; Attramadal, Kari; Vadstein, Olav. (2017) Influence of environmental factors on the microbiota associated with developing cod larvae (Gadus morhua). 1st International Fish-Microbiota Workshop . Ingrid Bakke, Olav Vadstein, John Rawls, Brendan Bohannan; Trondheim. 2017-06-19 - 2017-06-21.
  • Academic lecture
    Vestrum, Ragnhild Inderberg; Attramadal, Kari; Winge, Per; Li, Keshuai; Olsen, Yngvar; Bones, Atle M.; Vadstein, Olav; Bakke, Ingrid. (2017) Rearing water microbiota influences the microbiota and transcript profiles of cod larvae. 1st International Fish-Microbiota Workshop . NTNU, University of Oregon, Duke University; Trondheim. 2017-06-19 - 2017-06-21.
  • Academic lecture
    Vestrum, Ragnhild Inderberg; Attramadal, Kari; Winge, Per; Li, Keshuai; Olsen, Yngvar; Bones, Atle M.; Vadstein, Olav; Bakke, Ingrid. (2017) Rearing water microbiota influences the microbiota and transcript profiles of cod larvae. NBS Contact Meeting 2017 . Norsk Biokjemisk Selskap; Gol. 2017-01-19 - 2017-01-22.
  • Poster
    Vestrum, Ragnhild Inderberg; Attramadal, Kari; Winge, Per; Li, Keshuai; Olsen, Yngvar; Bones, Atle M.; Vadstein, Olav; Bakke, Ingrid. (2017) Rearing water treatment influences the microbiota and trancript profiles of cod larvae. Larvi 2017 . Ghent University and NTNU; Gent. 2017-09-04 - 2017-09-07.

2016

  • Poster
    Bakke, Ingrid; Nordgård, Anna Synnøve Røstad; Bergland, Wenche Hennie; Vadstein, Olav; Mironov, Vladimir; Østgaard, Kjetill; Bakke, Rune. (2016) Microbial community dynamics in anaerobic digestion at high ammonia concentrations. International Symposium on Microbial Ecology ISME 16 . International Society of Microbial Ecology; Montreal. 2016-08-21 - 2016-08-26.
  • Academic lecture
    Forberg, Torunn; Vestrum, Ragnhild Inderberg; Luef, Birgit; Winge, Per; Østensen, Mari-Ann; Olsen, Yngvar; Bakke, Ingrid; Vadstein, Olav. (2016) Host-microbe interactions in cod larvae. NBS seminar 2016 . NBS; Åre. 2016-04-06 - 2016-04-07.
  • Poster
    Vadstein, Olav; Gonzalez Silva, Blanca Magdalena; Jonassen, Kjell Rune; Østgaard, Kjetill; Bakke, Ingrid. (2016) Effect of salinity and salinity change on microbial community assembly and nitrification activity. International Symposium on Microbial Ecology ISME 16 ; 2016-08-21 - 2016-08-26.
  • Academic lecture
    Vestrum, Ragnhild Inderberg; Attramadal, Kari; Winge, Per; Li, Keshuai; Olsen, Yngvar; Bones, Atle M.; Vadstein, Olav; Bakke, Ingrid. (2016) Rearing water microbiota influences the microbiota and transcript profiles of cod larvae. NBS seminar 2016 . Norsk Biokjemisk Selskap; Åre. 2016-04-06 - 2016-04-07.
  • Poster
    Vestrum, Ragnhild Inderberg; Attramadal, Kari; Winge, Per; Li, Keshuai; Olsen, Yngvar; Bones, Atle M.; Vadstein, Olav; Bakke, Ingrid. (2016) Rearing water treatment influences the microbiota and transcript profiles of cod larvae. International Symposium on Microbial Ecology ISME 16 ; 2016-08-21 - 2016-08-26.

2015

  • Academic lecture
    Bakke, Ingrid; Åm, Ann-Louise; Kolarevic, Jelena; Ytrestøyl, Trine; Vadstein, Olav; Terjesen, Bendik Fyhn. (2015) Microbial community dynamics in three RAS with different salinities for production of Atlantic postsmolt. The 3rd NordicRAS workshop on RAS . Nordic Network on Recirculating Aquaculture Systems; Molde. 2015-09-30 - 2015-10-01.
  • Academic lecture
    Forberg, Torunn; Vadstein, Olav; Winge, Per; Bones, Atle M.; Luef, Birgit; Østensen, Mari-Ann; Bakke, Ingrid; Vestrum, Ragnhild Inderberg; Olsen, Yngvar. (2015) Development of a gnotobiotic system for Atlantic cod (Gadus morhua) larvae to study host-microbe interactions. Gut Microbiota Modulation of Host Physiology: The Search for mechanism . Keystone symposia; Keystone, Colorado. 2015-03-01 - 2015-03-06.
  • Lecture
    Gonzalez Silva, Blanca Magdalena; Jonassen, Kjell Rune; Bakke, Ingrid; Østgaard, Kjetill; Vadstein, Olav. (2015) Nitrification at different salinities: biofilm community composition and physiological plasticity. IWA Nutrient Removal and Recovery 2015: Moving innovation into practice ; 2015-05-18 - 2015-05-21.
  • Lecture
    Gonzalez Silva, Blanca Magdalena; Rønning, Are Johan; Andreassen, Ingrid Krogrud; Bakke, Ingrid; Østgaard, Kjetill; Cervantes, Francisco J.; Vadstein, Olav. (2015) Adaptation of a freshwater Anammox consortium to marine conditions to achieve nitrogen removal. 14th World Congress on Anaerobic Digestion ; 2015-11-15 - 2015-11-18.
  • Lecture
    Holan, Astrid Buran; Kolarevic, Jelena; Terjesen, Bendik Fyhn; Fossmark, Ragnhild Olsen; Bakke, Ingrid; Vadstein, Olav. (2015) Evaluation of membrane treatment effect on water quality in RAS for Atlantic salmon post-smolts. NordicRAS . NordicRAS Network; Molde. 2015-09-30 - 2015-10-01.
  • Academic lecture
    Vadstein, Olav; Attramadal, Kari; Bakke, Ingrid; Olsen, Yngvar. (2015) Beneficial Fish-Microbe Interactions: The Fourth Dimension of RAS. 3rd NordicRAS Workshop on Recirculating Aquaculture Systems ; Molde. 2015-09-30 - 2015-10-01.

2014

  • Interview
    Bakke, Ingrid. (2014) Forskningstokt i torsketarmen. adressa.no [Internett]. 2014-07-03.
  • Interview
    Bakke, Ingrid. (2014) Forskningstokt i torsketarmen. Gemini.no [Internett]. 2014-07-02.
  • Poster
    Li, Keshuai; Østensen, Mari-Ann; Attramadal, Kari; Winge, Per; Sparstad, Torfinn; Bakke, Ingrid; Bones, Atle M.; Vadstein, Olav; Kjørsvik, Elin; Olsen, Yngvar. (2014) GENE REGULATION OF ATLANTIC COD (GADUS MORHUA) LARVAE WITH FOCUS ON LIPID DIGESTION AND PHOSPHOLIPID METABOLISM. Aquaculture Europe 2014 ; 2014-10-14 - 2014-10-17.
  • Poster
    Nordgård, Anna Synnøve Røstad; Bergland, Wenche Hennie; Bakke, Rune; Østgaard, Kjetill; Bakke, Ingrid. (2014) Microbial community changes in granule-based UASB reactors due to substrate and load changes. 2nd International Conference on Biogas Microbiology ICBM ; Uppsala. 2014-06-10 - 2014-06-12.
  • Poster
    Vestrum, Ragnhild Inderberg; Forberg, Torunn; Bakke, Ingrid; Vadstein, Olav. (2014) Quorum sensing-hemmende bakterier beskytter torskelarver mot Vibrio anguillarum infeksjon. Programkonferansen HAVBRUK 2014 . Norsk Forskningsråd; Tromsø. 2014-03-31 - 2014-04-02.

2013

  • Academic lecture
    Attramadal, Kari; Øie, Gunvor; Kjørsvik, Elin; Minniti, Giusi; Olsen, Yngvar; Skjermo, Jorunn; Bakke, Ingrid; Østensen, Mari-Ann; Vadstein, Olav. (2013) Control of the selective pressure on microbes in rearing tanks through manipulation of the incoming water increases survival of marine fish larvae. Conference Larvi 2013 ; Gent. 2013-09-02 - 2013-09-05.
  • Academic lecture
    Bakke, Ingrid; Skjermo, Jorunn; Attramadal, Kari; Coward, Eivind; Kjørsvik, Elin; Vo, Tu Anh; Olsen, Yngvar; Vadstein, Olav. (2013) Bacterial community assembly in developing cod larvae (Gadus morhua). Conference Larvi 2013 ; Gent. 2013-09-02 - 2013-09-05.
  • Poster
    Li, Keshuai; Østensen, Mari-Ann; Attramadal, Kari; Winge, Per; Sparstad, Torfinn; Bakke, Ingrid; Bones, Atle M.; Vadstein, Olav; Kjørsvik, Elin; Olsen, Yngvar. (2013) GENE REGULATION OF ATLANTIC COD (GADUS MORHUA) LARVAE WITH FOCUS ON LIPID DIGESTION AND PHOSPHOLIPID METABOLISM. LARVI 2013 6th fish & shellfish larviculture symposium . Ghent University; Ghent. 2013-09-02 - 2013-09-05.
  • Poster
    Sousoni, D.; Bakke, Ingrid; Dahle, S.W.; Vadstein, Olav; Skjermo, Jorunn. (2013) Differences in the microbiota of cultivated microalgae and algal paste used in larviculture. AQUACULTURE EUROPE `13, ; Trondheim. 2013-08-09 - 2013-08-12.
  • Academic lecture
    Vadstein, Olav; Olsen, Yngvar; Attramadal, Kari; Bakke, Ingrid; Forberg, Torunn; Skjermo, Jorunn; Aasen, Inga Marie; Gatesoupe, F.J.; Dierckens, K.; De Schryver, P.; Yaacob, E.N.; Giatsis, C.; Verdegem, M.; Defoirdt, T.; Sorgeloos, P.; Bossier, P.. (2013) The microbial world of cultured larvae: a concept model. “Aquaculture conference: To the Next 40 Years of Sustainable Global Aquaculture”. ; Las Palmas, Gran Canaria. 2013-11-03 - 2013-11-07.

2012

  • Academic lecture
    Aasen, Inga Marie; Borgos, Sven Even F.; Giatsis, C.; Verdegem, M.J.C.; Gatesoupe, F.J.; Bakke, Ingrid; Vadstein, Olav. (2012) Profiling gut metabolites as response to diet and environmental microbiota. AQUA2012 ; Prague. 2012-09-01 - 2012-09-05.
  • Academic lecture
    Attramadal, Kari; Truong, T.H.H.; Bakke, Ingrid; Vadstein, Olav. (2012) RAS and microbial maturation as tools of K-selection of microbial communities improve survival in cod larvae. AQUA2012, September 1-5, Prague, Czech Republic. ; Prague. 2012-09-01 - 2012-09-05.
  • Academic lecture
    Attramadal, Kari; Truong, Thi My Hanh; Bakke, Ingrid; Vadstein, Olav; Skjermo, Jorunn; Olsen, Yngvar. (2012) RAS AND MICROBIAL MATURATION AS TOOLS OF K-SELECTION OF MICROBIAL COMMUNITIES IMPROVE SURVIVAL IN COD LARVAE. Aqua 2012 ; Praha. 2012-09-04 - 2012-09-04.
  • Academic lecture
    Bakke, Ingrid; Skjermo, Jorunn; Vo, Tu Anh; Vadstein, Olav. (2012) Diet is not a good tool for steering microbiota of cod larvae. Aqua 2012 ; Praha. 2012-09-01 - 2012-09-05.
  • Academic lecture
    Flo, Trude Helen; Steigedal, Magnus; Damås, Jan Kristian; Strong, Roland; Rognstad, Øyvind Bakken; Mobley, Harry LT; Vadstein, Olav; Bakke, Ingrid. (2012) Lipocalin 2 in protection of mucosal surfaces and shaping of intestinal microflora. EMBO|EMBL Symposium : New Perspectives on Immunity to Infection . EMBO/EMBL; Heidelberg. 2012-05-19 - 2012-05-22.
  • Poster
    Nordgård, Anna Synnøve Røstad; Bakke, Ingrid; Brakstad, Odd Gunnar; Østgaard, Kjetill. (2012) Detection of methanogenic archaea in DGGE by the use of primers for Methyl-Coenzyme M Reductase A (mcrA) genes. Nordic Biogas Conference . Energinet.dk; Copenhagen. 2012-04-23 - 2012-04-25.
  • Popular scientific lecture
    Vadstein, Olav; Bakke, Ingrid. (2012) Miljøbioteknologi. Campusbesøk . Bioteknologi; NTNU, Trondheim. 2012-02-15 - 2012-02-15.

2011

  • Academic lecture
    Vadstein, Olav; Skjermo, Jorunn; Attramadal, Kari; Bakke, Ingrid; Olsen, Yngvar. (2011) Microbial Resource Management for improved viability of marine fish larvae by community level selection of microbiota. 1st International Symposium on Microbial Resource Management in Biotechnology (MRM 2011) Concepts and Applications ; University of Ghent, Ghent. 2011-06-30 - 2011-07-01.

2010

  • Poster
    Bakke, Ingrid; Skjermo, Jorunn; Dahle, Stine Veronica Wiborg; Vadstein, Olav. (2010) Steering of cod larvae (Gadus morhua) gut microbiota: Timing for probiotic treatment. Gut Microbiology: new insights into gut microbial ecosystems ; Aberdeen, Scotland. 2010-07-23 - 2010-07-25.
  • Poster
    Skjermo, Jorunn; Tu Anh, Vo; Bakke, Ingrid; Overrein, Ingrid; Øie, Gunvor; Vadstein, Olav. (2010) Development of the gut microbiota in atlantic cod Gadus morhua L. larvae fed copepods and rotifers. Gut Microbiology: new insights into gut microbial ecosystems ; Aberdeen, Scotland. 2010-07-23 - 2010-07-25.
  • Poster
    Skjermo, Jorunn; Vo, Tu Anh; Bakke, Ingrid; Overrein, Ingrid; Øie, Gunvor; Vadstein, Olav. (2010) Development of the gut microbiota in atlantic cod Gadus morhua L. larvae fed copepods and rotifers. Aquaculture Europe 2010 ; Porto. 2010-10-05 - 2010-10-08.
  • Academic lecture
    Vadstein, Olav; Bakke, Ingrid; Skjermo, Jorunn. (2010) Determination of the time window for successful steering of the intestinal microflora in atlantic cod Gadus morhua L. Aquaculture Europe 2010 ; Porto. 2010-10-05 - 2010-10-08.

2009

  • Academic lecture
    Lale, Rahmi; Stuttgen, Friederike; Bakke, Ingrid; Valla, Svein. (2009) A comprehensive combinatorial approach to achieve high-level heterologous protein expression by chromosomal integration of a single gene copy in Escherichia coli. NBS Kontakmøtet 2009 ; Røros. 2009-01-29 - 2009-02-01.
  • Poster
    Norberg, Anne Line; Karlsen, Vigdis; Hoell, Ingunn A.; Bakke, Ingrid; Vårum, Kjell Morten; Eijsink, Vincent; Sørlie, Morten. (2009) Analysis of substrate binding to a family 18 chitinase by isothermal titration calorimetry and surface plasmon resonance to map subsite affinities and the kinetics that underly processivity. 8th Carbohydrate Bioengineering Meeting ; Napoli, Italia. 2009-05-10 - 2009-05-13.
  • Poster
    Norberg, Anne Line; Karlsen, Vigdis; Hoell, Ingunn A.; Bakke, Ingrid; Vårum, Kjell Morten; Eijsink, Vincent; Sørlie, Morten. (2009) Analysis of substrate binding to a family 18 chitinase by isothermal titration calorimetry and surface plasmon resonance to map subsite affinities and the kinetics that underly processivity. 9th International Conference of the European Chitin Society ; Venice, Italy. 2009-05-23 - 2009-05-26.

2008

  • Academic lecture
    Lale, Rahmi; Berg, Laila; Bakke, Ingrid; Burroughs, N.; Valla, Svein. (2008) 5'-untranslated region’s role in transcription. 5th Congress on Recombinant Protein Production ; Sardinia. 2008-09-24 - 2008-09-28.

2005

  • Poster
    Ertesvåg, Helga; Sletta, Håvard; Bakkevig, Karianne; Degnes, Kristin F; Jørgensen, Hanne; Bakke, Ingrid; Ellingsen, Trond E; Valla, Svein. (2005) The use of inducible promoters to study the biosynthesisof alginate in Pseudomonas fluorescens. Pseudomonas 10th International Congress ; Marseille. 2005-08-27 - 2005-08-31.
  • Poster
    Cederkvist, Fridtjof Henning; Saua, Silje; Karlsen, Vigdis; Bakke, Ingrid; Krokeide, Inger Mari; Eijsink, Vincent; Sørlie, Morten. (2005) Thermodynamic study of ligand binding to chitinase B from Serratia marcescens. "Food and Bioresource Enzyme Technology", 1st Workshop ; Hotel Fredriksdal, Denmark. 2005-09-25 - 2005-09-26.
  • Poster
    Cederkvist, Fridtjof Henning; Saua, Silje; Karlsen, Vigdis; Krokeide, Inger Mari; Bakke, Ingrid; Vaaje-Kolstad, Gustav; Eijsink, Vincent; Sørlie, Morten. (2005) Thermodynamic Study of Chitooligosaccharide Binding To Chitinase B of Serratia Marcescens. 6th Carbohydrate Bioengineering Meeting ; Barcelona, Spania. 2005-04-03 - 2005-04-06.

2003

  • Academic lecture
    Bakke, Ingrid; Berg, Laila; Valla, Svein. (2003) Mutations affecting recombinant gene expression from the Pm/xylS promoter system. 39. biokjemiske kontaktmøte (NBS) . [Mangler data]; Geilo. 2003-01-26.
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