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Stefanie Muff

Stefanie Muff

Associate Professor
Department of Mathematical Sciences

stefanie.muff@ntnu.no
Sentralbygg 2, 1040, Gløshaugen, Alfred Getz' vei 1
Google Scholar
About Publications Teaching Media

About

CV

Publications

  • Chronological
  • By category

2022

  • Aase, Kenneth; Jensen, Henrik; Muff, Stefanie. (2022) Genomic estimation of quantitative genetic parameters in wild admixed populations. Methods in Ecology and Evolution. volum 13 (5).
    Academic article
  • Egli, Mathias; Deforth, Manja; Keiser, Stefanie; Meyenberger, Patrick; Muff, Stefanie; Witt, Claudia M.; Barth, Jürgen. (2022) Effectiveness of hypnosis in third molar extraction: A randomized controlled trial (HypMol). Journal of Pain. volum 23 (6).
    Academic article
  • Muff, Stefanie; Nilsen, Erlend Birkeland; Nater, Chloe Rebecca; O'Hara, Robert B.. (2022) Joint reply to 'Rewriting results in the language of compatibility' by V. Amrhein and S. Greenland, and to 'The evidence contained in the P-value is context-dependent' by F. Hartig and F. Barraquand. Trends in Ecology & Evolution. volum 37 (7).
    Letter to the editor
  • Muff, Stefanie; Nilsen, Erlend Birkeland; O'Hara, Robert B.; Nater, Chloe Rebecca. (2022) Response to ‘Why P-values are not measures of evidence’ by D. Lakens. Trends in Ecology & Evolution.
    Letter to the editor

2021

  • Barth, Jürgen; Muff, Stefanie; Kern, Alexandra; Zieger, Anja; Keiser, Stefanie; Zoller, Marco; Rosemann, Thomas; Brinkhaus, Benno; Held, Leonhard; Witt, Claudia M.. (2021) Effect of Briefing on Acupuncture Treatment Outcome Expectations, Pain, and Adverse Side Effects among Patients with Chronic Low Back Pain: A Randomized Clinical Trial. JAMA Network Open. volum 4 (9).
    Academic article
  • Muff, Stefanie; Nilsen, Erlend Birkeland; OHara, Robert Brian; Nater, Chloe Rebecca. (2021) Rewriting results sections in the language of evidence. Trends in Ecology & Evolution.
    Scientific translation/review
  • Reid, Jane Margaret; Arcese, Peter; Nietlisbach, Pirmin; Wolak, Matthew; Muff, Stefanie; Dickel, Lisa; Keller, Lukas F.. (2021) Immigration counter-acts local micro-evolution of a major fitness component: migration-selection balance in free-living song sparrows. Evolution Letters. volum 5 (1).
    Academic article

2020

  • Lundregan, Sarah L.; Niskanen, Alina K.; Muff, Stefanie; Holand, Håkon; Kvalnes, Thomas; Ringsby, Thor-Harald; Husby, Arild; Jensen, Henrik. (2020) Resistance to gapeworm parasite has both additive and dominant genetic components in house sparrows, with evolutionary consequences for ability to respond to parasite challenge. Molecular Ecology. volum 29.
    Academic article
  • Niskanen, Alina Katariina; Billing, Anna Maria; Holand, Håkon; Hagen, Ingerid Julie; Araya-Ajoy, Yimen; Husby, Arild; Rønning, Bernt; Myhre, Ane Marlene; Ranke, Peter Sjolte; Kvalnes, Thomas; Pärn, Henrik; Ringsby, Thor Harald; Lien, Sigbjørn; Sæther, Bernt-Erik; Muff, Stefanie; Jensen, Henrik. (2020) Consistent scaling of inbreeding depression in space and time in a house sparrow metapopulation. Proceedings of the National Academy of Sciences of the United States of America. volum 117 (25).
    Academic article

2019

  • Bächinger, D.; Brühlmann, C.; Honegger, T.; Michalopoulou, E.; Monge Naldi, A.; Wettstein, V.G.; Muff, Stefanie; Schuknecht, B.; Eckhard, A.H.. (2019) Endotype-Phenotype Patterns in Meniere’s Disease Based on Gadolinium-Enhanced MRI of the Vestibular Aqueduct. Frontiers in Neurology. volum 10.
    Academic article
  • Bozzuto, Claudio; Biebach, Iris; Muff, Stefanie; Ives, Anothony R.; Keller, Lukas F.. (2019) Inbreeding reduces long-term growth of Alpine ibex populations. Nature Ecology and Evolution. volum 3.
    Academic article
  • Muff, Stefanie. (2019) Book review for "Bayesian Regression Modeling with INLA" by Xiaofeng Wang, Yu Ryan Yue, and Julian J. Faraway. Journal of the American Statistical Association. volum 114.
    Review
  • Muff, Stefanie; Niskanen, Alina Katariina; Saatoglu, Dilan; Keller, Lukas; Jensen, Henrik. (2019) Animal models with group-specific additive genetic variances: extending genetic group models. Genetics Selection Evolution. volum 51.
    Academic article
  • Muff, Stefanie; Signer, Johannes; Fieberg, John. (2019) Accounting for individual‐specific variation in habitat‐selection studies: Efficient estimation of mixed‐effects models using Bayesian or frequentist computation. Journal of Animal Ecology. volum 89 (1).
    Academic article
  • Nietlisbach, Pirmin; Muff, Stefanie; Reid, Jane M.; Whitlock, Michael; Keller, Lukas F.. (2019) Nonequivalent lethal equivalents: Models and inbreeding metrics for unbiased estimation of inbreeding load. Evolutionary Applications. volum 12 (2).
    Academic article
  • Nietlisbach, Pirmin; Muff, Stefanie; Reid, Jane Margaret; Whitlock, Michael; Keller, Lukas F.. (2019) Nonequivalent lethal equivalents: Models and inbreeding metrics for unbiased estimation of inbreeding load. Evolutionary Applications. volum 12.
    Academic article
  • Ponzi, Erica; Keller, Lukas F.; Muff, Stefanie. (2019) The simulation extrapolation technique meets ecology and evolution: A general and intuitive method to account for measurement error. Methods in Ecology and Evolution. volum 10 (10).
    Academic article
  • Weinberger, Irene; Muff, Stefanie; Kranz, Andreas; Bontadina, Fabio. (2019) Riparian vegetation provides crucial shelter for resting otters in a human-dominated landscape. Mammalian Biology. volum 98.
    Academic article

2018

  • Muff, Stefanie; Puhan, Milo A.; Held, Leonhard. (2018) Bias away from the Null due to miscounted outcomes? A case study on the TORCH trial. Statistical Methods in Medical Research. volum 27.
    Academic article
  • Ponzi, Erica; Keller, Lukas F.; Bonnet, Timothee; Muff, Stefanie. (2018) eritability, selection, and the response to selection in the presence of phenotypic measurement error: effects, cures, and the role of repeated measurements. Evolution. volum 72.
    Academic article

Scientific articles

  • Aase, Kenneth; Jensen, Henrik; Muff, Stefanie. (2022) Genomic estimation of quantitative genetic parameters in wild admixed populations. Methods in Ecology and Evolution. volum 13 (5).
    Academic article
  • Egli, Mathias; Deforth, Manja; Keiser, Stefanie; Meyenberger, Patrick; Muff, Stefanie; Witt, Claudia M.; Barth, Jürgen. (2022) Effectiveness of hypnosis in third molar extraction: A randomized controlled trial (HypMol). Journal of Pain. volum 23 (6).
    Academic article
  • Barth, Jürgen; Muff, Stefanie; Kern, Alexandra; Zieger, Anja; Keiser, Stefanie; Zoller, Marco; Rosemann, Thomas; Brinkhaus, Benno; Held, Leonhard; Witt, Claudia M.. (2021) Effect of Briefing on Acupuncture Treatment Outcome Expectations, Pain, and Adverse Side Effects among Patients with Chronic Low Back Pain: A Randomized Clinical Trial. JAMA Network Open. volum 4 (9).
    Academic article
  • Reid, Jane Margaret; Arcese, Peter; Nietlisbach, Pirmin; Wolak, Matthew; Muff, Stefanie; Dickel, Lisa; Keller, Lukas F.. (2021) Immigration counter-acts local micro-evolution of a major fitness component: migration-selection balance in free-living song sparrows. Evolution Letters. volum 5 (1).
    Academic article
  • Lundregan, Sarah L.; Niskanen, Alina K.; Muff, Stefanie; Holand, Håkon; Kvalnes, Thomas; Ringsby, Thor-Harald; Husby, Arild; Jensen, Henrik. (2020) Resistance to gapeworm parasite has both additive and dominant genetic components in house sparrows, with evolutionary consequences for ability to respond to parasite challenge. Molecular Ecology. volum 29.
    Academic article
  • Niskanen, Alina Katariina; Billing, Anna Maria; Holand, Håkon; Hagen, Ingerid Julie; Araya-Ajoy, Yimen; Husby, Arild; Rønning, Bernt; Myhre, Ane Marlene; Ranke, Peter Sjolte; Kvalnes, Thomas; Pärn, Henrik; Ringsby, Thor Harald; Lien, Sigbjørn; Sæther, Bernt-Erik; Muff, Stefanie; Jensen, Henrik. (2020) Consistent scaling of inbreeding depression in space and time in a house sparrow metapopulation. Proceedings of the National Academy of Sciences of the United States of America. volum 117 (25).
    Academic article
  • Bächinger, D.; Brühlmann, C.; Honegger, T.; Michalopoulou, E.; Monge Naldi, A.; Wettstein, V.G.; Muff, Stefanie; Schuknecht, B.; Eckhard, A.H.. (2019) Endotype-Phenotype Patterns in Meniere’s Disease Based on Gadolinium-Enhanced MRI of the Vestibular Aqueduct. Frontiers in Neurology. volum 10.
    Academic article
  • Bozzuto, Claudio; Biebach, Iris; Muff, Stefanie; Ives, Anothony R.; Keller, Lukas F.. (2019) Inbreeding reduces long-term growth of Alpine ibex populations. Nature Ecology and Evolution. volum 3.
    Academic article
  • Muff, Stefanie; Niskanen, Alina Katariina; Saatoglu, Dilan; Keller, Lukas; Jensen, Henrik. (2019) Animal models with group-specific additive genetic variances: extending genetic group models. Genetics Selection Evolution. volum 51.
    Academic article
  • Muff, Stefanie; Signer, Johannes; Fieberg, John. (2019) Accounting for individual‐specific variation in habitat‐selection studies: Efficient estimation of mixed‐effects models using Bayesian or frequentist computation. Journal of Animal Ecology. volum 89 (1).
    Academic article
  • Nietlisbach, Pirmin; Muff, Stefanie; Reid, Jane M.; Whitlock, Michael; Keller, Lukas F.. (2019) Nonequivalent lethal equivalents: Models and inbreeding metrics for unbiased estimation of inbreeding load. Evolutionary Applications. volum 12 (2).
    Academic article
  • Nietlisbach, Pirmin; Muff, Stefanie; Reid, Jane Margaret; Whitlock, Michael; Keller, Lukas F.. (2019) Nonequivalent lethal equivalents: Models and inbreeding metrics for unbiased estimation of inbreeding load. Evolutionary Applications. volum 12.
    Academic article
  • Ponzi, Erica; Keller, Lukas F.; Muff, Stefanie. (2019) The simulation extrapolation technique meets ecology and evolution: A general and intuitive method to account for measurement error. Methods in Ecology and Evolution. volum 10 (10).
    Academic article
  • Weinberger, Irene; Muff, Stefanie; Kranz, Andreas; Bontadina, Fabio. (2019) Riparian vegetation provides crucial shelter for resting otters in a human-dominated landscape. Mammalian Biology. volum 98.
    Academic article
  • Muff, Stefanie; Puhan, Milo A.; Held, Leonhard. (2018) Bias away from the Null due to miscounted outcomes? A case study on the TORCH trial. Statistical Methods in Medical Research. volum 27.
    Academic article
  • Ponzi, Erica; Keller, Lukas F.; Bonnet, Timothee; Muff, Stefanie. (2018) eritability, selection, and the response to selection in the presence of phenotypic measurement error: effects, cures, and the role of repeated measurements. Evolution. volum 72.
    Academic article

Journal publications

  • Muff, Stefanie; Nilsen, Erlend Birkeland; Nater, Chloe Rebecca; O'Hara, Robert B.. (2022) Joint reply to 'Rewriting results in the language of compatibility' by V. Amrhein and S. Greenland, and to 'The evidence contained in the P-value is context-dependent' by F. Hartig and F. Barraquand. Trends in Ecology & Evolution. volum 37 (7).
    Letter to the editor
  • Muff, Stefanie; Nilsen, Erlend Birkeland; O'Hara, Robert B.; Nater, Chloe Rebecca. (2022) Response to ‘Why P-values are not measures of evidence’ by D. Lakens. Trends in Ecology & Evolution.
    Letter to the editor
  • Muff, Stefanie; Nilsen, Erlend Birkeland; OHara, Robert Brian; Nater, Chloe Rebecca. (2021) Rewriting results sections in the language of evidence. Trends in Ecology & Evolution.
    Scientific translation/review
  • Muff, Stefanie. (2019) Book review for "Bayesian Regression Modeling with INLA" by Xiaofeng Wang, Yu Ryan Yue, and Julian J. Faraway. Journal of the American Statistical Association. volum 114.
    Review

Teaching

Courses

  • TMA4268 - Statistical Learning

Media

2022

  • Poster
    Ghimire, Kiran; Burnett, Hamish Andrew; Goedert, Debora; Ranke, Peter Sjolte; Muff, Stefanie; Ringsby, Thor Harald; Sæther, Bernt-Erik; Reid, Jane Margaret; Jensen, Henrik. (2022) Effects of inbreeding on nestling fitness in an insular house sparrow metapopulation in northern Norway. 5th Conference of Nordic Society OIKOS 2022 . Nordic Society Oikos; Aarhus. 2022-06-07 - 2022-06-10.
  • Lecture
    Halbritter Rechsteiner, Aud Helen; Endresen, Dag; Nilsen, Erlend Birkeland; Chipperfield, Joseph; Grainger, Matthew; Telford, Richard James; Cotner, Sehoya Harris; Muff, Stefanie. (2022) Open, Reproducible, and Transparent Science in Ecology. Open, Reproducible, and Transparent Science in Ecology . GBIF Norway, Living Norway Ecological Data Network, BioDATA, University of Bergen, and University of Oslo; Finse. 2022-11-14 - 2022-11-18.
  • Academic lecture
    Muff, Stefanie. (2022) Efficient mixed-effects modeling in habitat selection studies. The Wildlife Society Annual Conference ; 2022-11-06 - 2022-11-10.
  • Lecture
    Muff, Stefanie. (2022) Methods for modeling data from multiple individuals - Implementation of SSFs in INLA and glmmTMB. International Statistical Ecology Conference ; Cape Town. 2022-06-26.
  • Poster
    Skarstein, Emma Sofie; Martino, Sara; Muff, Stefanie. (2022) We show how to handle missing data in INLA by generalizing exising measurement error models. ISBA World Meeting 2022 . The International Society for Bayesian Analysis; Montreal. 2022-06-26 - 2022-07-01.

2021

  • Poster
    Aspheim, Janne Cathrin Hetle; Jensen, Henrik; Reid, Jane Margaret; Bolstad, Geir Hysing; OHara, Robert Brian; Kvalnes, Thomas; Muff, Stefanie. (2021) Marker-based estimation of additive genetic variance using dimension-reduction techniques - methods from animal breeding adapted to wild study systems using a Bayesian framework. he 28th Nordic Conference in Mathematical Statistics ; Tromsø. 2021-06-21 - 2021-06-24.
  • Documentary
    Bazilchuk, Nancy Reney; Jensen, Henrik; Ringsby, Thor Harald; Muff, Stefanie. (2021) Darwin had Galapagos finches. Norway has… house sparrows?. https://shows.acast.com/63-degrees-north/episodes/ [Internett]. 2021-02-26.
  • Poster
    Siren, Jenni; Niskanen, Alina Katariina; Muff, Stefanie; Jensen, Henrik. (2021) Interactions of environment and inbreeding in house sparrows (Passer domesticus). 4th Symposium for Molecular Ecology and Evolution in Finland . University of Oulu; Oulu. 2021-10-05 - 2021-10-07.
  • Poster
    Skarstein, Emma Sofie; Muff, Stefanie. (2021) A Joint Bayesian Framework for Measurement Error and Missing Data. NORDSTAT . UiT; Tromsø. 2021-06-21 - 2021-06-24.

2020

  • Academic lecture
    Muff, Stefanie. (2020) Statistical methods in quantitative genetics. Genetic group models and marker-based regression. Talk at Centre for Advanced Study (CAS) . Centre for Advanced Study (CAS); Oslo. 2020-03-17 - 2020-03-17.

2019

  • Poster
    Lundregan, Sarah; Muff, Stefanie; Kvalnes, Thomas; Niskanen, Alina Katariina; Holand, Håkon; Husby, Arild; Jensen, Henrik. (2019) Susceptibility to gapeworm parasite has both additive and dominant genetic components in house sparrows. 2019 Congress of the European Society for Evolutionary Biology (ESEB) . European Society for Evolutionary Biology (ESEB); Turku. 2019-08-19 - 2019-08-24.
  • Academic lecture
    Niskanen, Alina Katariina; Billing, Anna Maria; Holand, Håkon; Hagen, Ingerid Julie; Huisman, Jisca; Araya-Ajoy, Yimen; Husby, Arild; Rønning, Bernt; Myhre, Ane Marlene; Ranke, Peter Sjolte; Kvalnes, Thomas; Pärn, Henrik; Ringsby, Thor Harald; Lien, Sigbjørn; Sæther, Bernt-Erik; Muff, Stefanie; Jensen, Henrik. (2019) Inbreeding depression in a house sparrow metapopulation. Molecular Ecology and Evolution Lab meeting . University of Oulu; Oulu. 2019-01-24 - 2019-01-24.
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