Course - Bioinformatics and Biopolymeric Materials, Specialization Course - TBT4508
Bioinformatics and Biopolymeric Materials, Specialization Course
About
About the course
Course content
In 'Biopolymeric Materials', emphasis will be placed on the properties and behavior of biological macromolecules at concentrations above critical overlap concentration, such as viscosity profile, order / disorder transitions, gel formation, viscoelastic properties and phase behavior when mixing macromolecules. Examples of the use of biopolymers will be given with special emphasis on biomedicine and biopolymers used in immobilization of cells and enzymes. Demonstration of rheological equipment for characterization of soft materials will be given.
The Bioinformatics part (50%) gives a comprehensive introduction to DNA analysis. Each student receives a 20 kb large "raw" DNA-sequence with unknown identity and origin (bacterial, archaeal, or eukaryotic). The students in groups of 2-4 is expected to analyse the sequence based on questions raised in an available compendium. This bioinformatic part is using a practical approach where the students are guided and have to use a wide portfolio of electronic bioinformatic tools. The students will submit several reports throughout the course work, where each is building on the previous, and all are included in the basis for grading.
Learning outcome
Biopolymeric materials: Basic knowledge of biological biopolymers in concentrated solutions and gels, materials based on them and how such materials can be tailored and changed to defined properties. Bioinformatics: The student learns how to read DNA.
Learning methods and activities
Biopolymeric materials: Lectures and demonstrations. The bioinformatic part uses a problem-based learning approach.
Further on evaluation
Biopolymeric materials: Written exam.
Bioinformatics: Based on a raport. Each graded part (written exam in Biopolymeric Materials, report in Bioinformatics) counts 50% of the total grade in the course.
Both the report and the written exam must be passed to pass the course.
If there is a re-sit examination, the examination form may be changed from written to oral.In case of retake after a failed exam or to improve grade, students can choose to retake only one part of the assessment.
Recommended previous knowledge
Previous knowledge in biochemistry, microbiology, biochemical engineering, and molecular genetics is required; e.g. corresponding to the courses TBT4107, TBT4110, TBT4145 and TBT4135. Bioinformatics: basic knowledge in biochemistry, microbiology, and cell biology; e.g. corresponding to the courses TBT4102 Biochemistry 1, TBT4107 Biochemistry 2, and TBT4110 Microbiology.
Course materials
Information will be given at commencement of the course. Bioinformatics: Information will be given at commencement of the course. This part relies on use of freely available online websites/softwares.
Credit reductions
Course code | Reduction | From |
---|---|---|
TBT4506 | 3.7 sp | Autumn 2020 |
TBT4507 | 3.7 sp | Autumn 2020 |
Subject areas
- Technological subjects
Contact information
Course coordinator
Lecturers
Department with academic responsibility
Examination
Examination
Ordinary examination - Autumn 2025
School exam
The specified room can be changed and the final location will be ready no later than 3 days before the exam. You can find your room location on Studentweb.